Arabidopsis thaliana (thale cress): AT5G63880
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Entry
AT5G63880 CDS
T00041
Symbol
VPS20.1
Name
(RefSeq) SNF7 family protein
KO
K12195
charged multivesicular body protein 6
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03250
Viral life cycle - HIV-1
ath04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
AT5G63880 (VPS20.1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
AT5G63880 (VPS20.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT5G63880 (VPS20.1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT5G63880 (VPS20.1)
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
AT5G63880 (VPS20.1)
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AT5G63880 (VPS20.1)
Exosomal proteins of other body fluids (saliva and urine)
AT5G63880 (VPS20.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
TINF2_N
CesT_Tir_1
FUSC
DUF1269
Motif
Other DBs
NCBI-GeneID:
836508
NCBI-ProteinID:
NP_568980
TAIR:
AT5G63880
UniProt:
Q8GXN6
A0A178UBY0
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All DBs
Position
5:25563724..25565498
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AA seq
219 aa
AA seq
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MGNLFVKKPQITEVDRAILSLKTQRRKLGQYQQKLEKVIEAEKQAARDLIREKRKDRALL
ALRKKRTQEELLKQVDQWVINVEQQLTDIELTSKQKAVFESLKQGNSAIKAIQSELDLDD
VQKLMDDTADAKAYQDELNAILGEKLSAEDEEDILAEFDNLESQLIVDEMPEVPTKESEE
SEKLDLPDVPTKTPVASNAEITPAESATKTKVLEEPLPA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggggaatttgttcgtgaagaaaccacagatcacggaggttgatcgagcgattctctct
ctcaaaacccaaagacgcaagcttggtcaatatcagcagaagcttgagaaagtaattgaa
gcggaaaagcaagctgcaagagacttaatccgtgaaaagcgaaaggacagagctttgtta
gcattgaggaagaaacgaactcaagaagagttattgaagcaagtggatcaatgggtcatc
aatgttgaacaacaattaacagatattgaacttacgagcaaacaaaaggcagtgtttgag
agcttaaagcagggtaatagtgctattaaggccattcaaagcgaattggaccttgatgat
gttcaaaaactaatggatgatactgctgatgctaaagcttatcaagatgagctgaacgct
atattgggagagaaactatcagcagaggatgaggaagatatattagcagaatttgacaac
ctagaaagtcagcttattgttgatgagatgcctgaagtgcctacaaaggagtctgaagaa
tctgagaagctggatcttccggatgtgccaacaaaaactcctgtcgcttccaatgcggaa
atcacaccagctgagtccgccacaaaaacaaaagttctcgaagaacctttgccggcttga
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integrated database retrieval system