KEGG   Arabidopsis thaliana (thale cress): AT5G63880
Entry
AT5G63880         CDS       T00041                                 
Symbol
VPS20.1
Name
(RefSeq) SNF7 family protein
  KO
K12195  charged multivesicular body protein 6
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03250  Viral life cycle - HIV-1
ath04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    AT5G63880 (VPS20.1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    AT5G63880 (VPS20.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT5G63880 (VPS20.1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT5G63880 (VPS20.1)
Membrane trafficking [BR:ath04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    AT5G63880 (VPS20.1)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AT5G63880 (VPS20.1)
  Exosomal proteins of other body fluids (saliva and urine)
   AT5G63880 (VPS20.1)
SSDB
Motif
Pfam: Snf7 TINF2_N CesT_Tir_1 FUSC DUF1269
Other DBs
NCBI-GeneID: 836508
NCBI-ProteinID: NP_568980
TAIR: AT5G63880
UniProt: Q8GXN6 A0A178UBY0
LinkDB
Position
5:25563724..25565498
AA seq 219 aa
MGNLFVKKPQITEVDRAILSLKTQRRKLGQYQQKLEKVIEAEKQAARDLIREKRKDRALL
ALRKKRTQEELLKQVDQWVINVEQQLTDIELTSKQKAVFESLKQGNSAIKAIQSELDLDD
VQKLMDDTADAKAYQDELNAILGEKLSAEDEEDILAEFDNLESQLIVDEMPEVPTKESEE
SEKLDLPDVPTKTPVASNAEITPAESATKTKVLEEPLPA
NT seq 660 nt   +upstreamnt  +downstreamnt
atggggaatttgttcgtgaagaaaccacagatcacggaggttgatcgagcgattctctct
ctcaaaacccaaagacgcaagcttggtcaatatcagcagaagcttgagaaagtaattgaa
gcggaaaagcaagctgcaagagacttaatccgtgaaaagcgaaaggacagagctttgtta
gcattgaggaagaaacgaactcaagaagagttattgaagcaagtggatcaatgggtcatc
aatgttgaacaacaattaacagatattgaacttacgagcaaacaaaaggcagtgtttgag
agcttaaagcagggtaatagtgctattaaggccattcaaagcgaattggaccttgatgat
gttcaaaaactaatggatgatactgctgatgctaaagcttatcaagatgagctgaacgct
atattgggagagaaactatcagcagaggatgaggaagatatattagcagaatttgacaac
ctagaaagtcagcttattgttgatgagatgcctgaagtgcctacaaaggagtctgaagaa
tctgagaagctggatcttccggatgtgccaacaaaaactcctgtcgcttccaatgcggaa
atcacaccagctgagtccgccacaaaaacaaaagttctcgaagaacctttgccggcttga

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