Arabidopsis thaliana (thale cress): AT5G65260
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Entry
AT5G65260 CDS
T00041
Name
(RefSeq) RNA-binding (RRM/RBD/RNP motifs) family protein
KO
K14396
polyadenylate-binding protein 2
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AT5G65260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G65260
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
AT5G65260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_DEAH11
RRM_7
FTA4
Lge1
T2SSM
Motif
Other DBs
NCBI-GeneID:
836651
NCBI-ProteinID:
NP_201329
TAIR:
AT5G65260
UniProt:
Q9FJN9
A0A654GEA3
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All DBs
Position
5:complement(26080222..26083066)
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AA seq
220 aa
AA seq
DB search
MEEEEHEVYGGEIPDVGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAAL
REMQAKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHR
VTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGRR
FNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPYQ
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaggagcacgaggtttacggtggtgaaattccagacgtcggagagatggat
ggagatatggaggctctcaaccccgatttggatatggctgctgctgatgatgatgcggtt
aaggagttggatgaaatgaagaaacgattgaaagagatggaggacgaagctgctgctctg
cgtgagatgcaggctaaggtcgagaaggaaatgggagctcaagatcctgctagtattgca
gcgaatcaagcaggcaaggaggaggttgatgctcgatcagtttttgttggcaatgttgat
tacgcttgcacacctgaagaagttcagcagcatttccaaacatgcggcactgtccatcgg
gtgaccattctgacagacaaattcgggcagccaaagggatttgcatatgtagaattcgtc
gaagtggaagctgttcaagaggctctacaactgaatgaatcagagctacatggtcgtcaa
ttaaaggtcttgcagaagagaacaaacgttcctggattgaaacagttccgtggtagacga
ttcaatccatacatgggttaccggttccgcagacctttcatgtctccttatatgtattcc
ccatatggatacggaaaagctcctaggtttagaaggcctatgcgttacatgccgtaccaa
taa
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