KEGG   Arabidopsis thaliana (thale cress): AT5G66100
Entry
AT5G66100         CDS       T00041                                 
Symbol
LARP1b
Name
(RefSeq) winged-helix DNA-binding transcription factor family protein
  KO
K18757  la-related protein 1
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT5G66100 (LARP1b)
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     AT5G66100 (LARP1b)
SSDB
Motif
Pfam: La
Other DBs
NCBI-GeneID: 836742
NCBI-ProteinID: NP_201411
TAIR: AT5G66100
UniProt: Q8RWR2 A0A178UJQ0
LinkDB
Position
5:26427186..26430108
AA seq 453 aa
MMATTASSAANSASRFSIDSSISRSRHGDSSPWLLPSDSHDHPTLSLSQDDPFSAPSVSP
PTGNNSSDYDNADKKPPPVWNMPSSNSSSDVGPVMGAAESWPALSLSARSSSIKSPSLDA
SKPFPDGSSSSIPPPQATSNTSTNANAGSSVSATSSENSAVNNSQRKPFRRNNNTSSSST
SSNVSNAAPLNTRDQNHSQRGGGSFGSGNFRNSQRNRNSSSYPRGEGLHHGNRRNYEHGN
QSGFSHRNYSGRDMHLQPQRGVGMIRPQMLMGPPSFPASSAQYMAAPQLGSYGGPIIYPD
YAQHVFMPHPSPDPMGLVGPFPLQPMYFRNFDAILYNKILTQVEYYFSADNLSRDEHLRD
QMNDEGWVPVRVIAAFRRLAELTNNIQTILEALRSSEVVEIQGETLRRRGDWDKYLLPRE
PSRSGPAAGASNNASLVSQIESMTLSERSREGV
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgatggctacgacggcgagtagtgccgctaattctgcatctcgcttctccattgattcc
tctatctcgcgatcacgtcacggcgattcctctccctggttgttaccttctgattcccat
gatcatccgactctttccctctcccaggacgatcccttctcagcgccttcggtctccccg
cccaccggaaataactcttccgactacgacaatgctgataagaagcctcctcctgtctgg
aacatgccttcttctaatagctcctccgatgtcggccctgtcatgggcgccgccgaatcc
tggcctgctctctctctttctgctcgctcttcttccatcaagtctccctctttggatgct
tccaaaccttttcctgatggatcatcgtcatcaataccgcctccccaggctacttccaac
accagcaccaatgccaatgcaggctcgagtgtttctgctacctcatctgaaaacagtgct
gttaataatagccagaggaaaccttttagacggaataacaacacatcatcttccagtacc
agtagtaacgtctccaatgctgcgcctttaaacaccagagatcagaatcacagccaaagg
ggtggtggctcttttggttcagggaatttccgtaattctcagaggaatcgcaacagcagc
tcttaccctcgtggggaaggtcttcaccatggaaacaggcgcaattatgagcatggcaac
caaagcggcttttctcaccgtaactatagtgggagagacatgcacttgcaaccgcagagg
ggtgttgggatgattagaccgcagatgctgatggggccaccatcttttcctgccagtagt
gcgcaatatatggcagcgcctcaattaggttcatatggtggccccattatctacccagat
tatgcacagcatgtctttatgccacatccatctccagatccgatgggtttagttggaccc
ttcccacttcaacccatgtattttcgcaattttgatgccatcttgtacaataagatattg
acacaagtagaatattatttcagcgctgataacctgagcagagatgaacatttacgggat
cagatgaatgatgaaggttgggttcctgttagagtaatagcagcattcaggagacttgcg
gaactgaccaataacatccagactatattggaagcactgagaagttcagaagtcgtggaa
attcagggtgaaacattaaggaggcgaggagattgggacaagtatttattgcctcgtgag
ccttcaaggtccggtccagctgcgggggctagcaacaatgcctcactggtgtctcaaatt
gagagcatgactctatcagagaggagcagagagggagtgtaa

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