Arabidopsis thaliana (thale cress): AT5G67530
Help
Entry
AT5G67530 CDS
T00041
Symbol
PUB49
Name
(RefSeq) plant U-box 49
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
AT5G67530 (PUB49)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT5G67530 (PUB49)
03110 Chaperones and folding catalysts [BR:
ath03110
]
AT5G67530 (PUB49)
04121 Ubiquitin system [BR:
ath04121
]
AT5G67530 (PUB49)
Enzymes [BR:
ath01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
AT5G67530 (PUB49)
Spliceosome [BR:
ath03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
AT5G67530 (PUB49)
Complex C
U4/U6.U5 tri-SnRNP related factors
AT5G67530 (PUB49)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
AT5G67530 (PUB49)
Chaperones and folding catalysts [BR:
ath03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
AT5G67530 (PUB49)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
U-box type E3
AT5G67530 (PUB49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
zf-NOSIP
U-box
Rtf2
Motif
Other DBs
NCBI-GeneID:
836889
NCBI-ProteinID:
NP_201554
TAIR:
AT5G67530
UniProt:
Q9FJX0
LinkDB
All DBs
Position
5:26941074..26944146
Genome browser
AA seq
595 aa
AA seq
DB search
MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKSLPYYCCALTFLPFEDPVCTIDGSV
FEITTIVPYIRKFGKHPVTGAPLKGEDLIPLIFHKNSEGEYHCPVLNKVFTEFTHIVAVK
TTGNVFCYEAIKELNIKTKNWKELLTEEPFTRADLITIQNPNAVDGKVTVEFDHVKNGLK
IDDEELKKMNSDPAYNINVSGDIKHMLADLGTDKAKEIALHGGGGNKARNERAAAIAAIL
ESRSKIKEVSKAEQPKQTYSVVDAASASVFGRSADAAKAGSSDKTAARIAMHMAGDRTPV
NSKMVKSRYSSGAASRSFTSSAFTPVTKNDFELIKVEKNPKKKGYVQFQTTHGDLNIELH
CDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGKGGESIWGKPFKDEPNS
KLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENVPVD
ESDRPLEEIKIIEASVFVNPYTELDEEEEKEKAEKEKNEDKDIEKIGSWYSNPGSGTTEA
GAGGGGVGKYLKAMSSTATKDTKGSLDSDISTIGVSKKRKTTASASTGFKDFSSW
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacaacacagcaaagatcggatgttcataacgaagacggagtgggcaaca
gaatggggaggcgctaaatccaaagagaatcgaactcctttcaagagtcttccttactat
tgctgcgcgcttacgtttttgccattcgaagatcctgtgtgtacaatcgacgggagtgtt
ttcgagataacaacaatagtgccttacattaggaaatttggaaaacatcctgttactgga
gctccattgaaaggagaagatctaattcctctcatctttcacaagaactctgaaggagag
tatcattgtcctgttctaaacaaagtcttcactgaatttacacatattgttgctgtcaag
actactggaaatgtattctgctacgaggcaatcaaagagttgaatatcaaaaccaagaat
tggaaggagcttttaactgaagaaccatttacaagagccgaccttataacaattcagaat
cctaatgcagttgatggtaaagtgacggtggagtttgatcatgttaaaaacggtcttaag
atcgatgatgaagagttgaaaaagatgaactcagaccctgcttataatataaacgtgtct
ggagatatcaagcacatgcttgcagatcttggaactgataaagctaaagagattgcttta
catggtggaggtggaaacaaggcacgtaatgaaagagccgctgctattgctgcgattctg
gagtcaagatcgaaaatcaaagaggtttctaaagcagaacaaccgaaacagacctacagt
gttgttgatgctgcatctgcttcggtttttggaagaagtgctgatgcagctaaagctggt
tctagtgataaaacagctgcaagaatagctatgcatatggctggagatagaacacctgtt
aattctaaaatggtgaagagccgttattcgtcgggtgctgcttctcgttctttcacttcc
tctgcctttactcctgtaaccaaaaacgattttgaactaattaaagtcgagaaaaacccg
aaaaagaaagggtatgttcagtttcagacaacacatggcgatttgaacattgagctccat
tgcgatatagctcctagagcatgtgagaatttcatcactctctgtgaacgtggttactac
aatggagtggcctttcacagaagtatcaggaacttcatgattcaagggggcgatccaact
ggcacaggaaaaggaggtgaatccatttgggggaagccattcaaagacgagccaaactcg
aagctgcttcactcaggaagaggcgtagttagtatggctaatagtggacctcacacaaat
ggttctcagtttttcgtcttatacaaatcagcgacccatttaaactacaagcacacagtg
tttggtggagttgttggtggtttggcaacactagcagcaatggagaatgtacctgtagat
gaaagcgaccgtcctcttgaagagattaagataatcgaggcaagtgtgtttgtgaatcca
tacacggagcttgatgaagaggaagagaaagagaaagctgagaaagagaagaatgaagac
aaagacattgagaagatcgggtcgtggtacagcaacccgggatcaggaacaacagaagct
ggagcgggtggcggtggtgtcggaaaatacttgaaagctatgagtagtacagccactaaa
gacactaaaggttccctagactcagatatttcaaccattggagtgtctaagaaaagaaaa
actactgcgtcagcctccacagggtttaaagatttctctagctggtaa
DBGET
integrated database retrieval system
