Aneurinibacillus thermoaerophilus: K3F53_00910
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Entry
K3F53_00910 CDS
T07487
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
athe
Aneurinibacillus thermoaerophilus
Pathway
athe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
athe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K3F53_00910 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
athe03021
]
K3F53_00910 (rpoC)
03400 DNA repair and recombination proteins [BR:
athe03400
]
K3F53_00910 (rpoC)
Enzymes [BR:
athe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K3F53_00910 (rpoC)
Transcription machinery [BR:
athe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K3F53_00910 (rpoC)
DNA repair and recombination proteins [BR:
athe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K3F53_00910 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QYY42957
LinkDB
All DBs
Position
180709..184350
Genome browser
AA seq
1213 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRSLEEVIYFASYVVIDPGETPLEKKQLLSEKEYRNYREKYGSSFTAMMGAEAIKRLLA
EIDLDKEVDCLKEELKSAQGQRRNRVIKRLEVLEAFRNSGNRPEWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKMYQCGLPKE
MALELFKPFVMKELVAKGLAHNIKSAKRKVERVHPEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGTYYLTMEDKTSKGEGKVFSNPNQAIAAYANGHITLHARIALP
PKSLNKTSFTPEQFAAPLMVTTVGKLIFNEIFPPELPYINEPTKENLQKKVPDKFFIFEK
GTNVREFLEKLPEQDAVKKGYLGTIIAECFRRFGTTQTSIILDKIKENGFKYSTQAGITV
AVADIKTPPEKQQILEEAEKKVQSVMQQYRRGLITENERYDRVISIWSKAKDDVTKVLMA
SLDKFNAINMMATSGARGNVSQITQLAGMRGLMANPSGRIIELPIKSNFREGLTVLEYFI
STHGARKGLADTALRTADSGYLTRRLVDVAQDVIVREEDCGTDKGVVATALRDGNEIIEE
LQDRIVGRYSFQTVRHPETGEIIVGRNQLIDEKIAEEIVAAGITEVNIRSVIGCRTQHGV
CRKCYGRNLATGNVVDIGESVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQE
LFEARNPKGQAVITEIEGEVIDIREGKDRREVEIRGETENKVYQIPYGSRLKVFVGSKVD
LGEELTEGSIDPKEMLKIRGMRGVQYYILQEVQKVYRMQGVEINDKHIEVMIRQMLRKVR
IIDSGDTELLPGSYVEIHEFEEANKKALWDGKQPAVARPVLLGITKASLETDSFLSAASF
QETTRVLTDAAIKGKVDRLLGLKENVIIGKLLPAGTGMTRYRNIALKHELMPAEEVAEEA
LDESQLKDVILEK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
ttgttagatgtcaataattttgaatatatgaagatcggccttgcatcacccgataagatt
cgttcctggtcttacggagaggtcaaaaaaccggaaaccattaactaccggaccttaaaa
ccggaaaaagaaggcttgttctgcgagaaaattttcgggccgacaaaagactgggaatgt
cattgcggaaagtacaaacgtgttcgttataaaggcgtagtttgcgatcgttgcggcgtt
gaagtaacccgtgcgaaagtgcgccgggagcgcatggggcacattgaattggctgcccct
gtctcccatatctggtattttaaagggattccgagccgtatgggtcttgtgcttgacatg
tccccacgctctctagaagaggttatctatttcgcatcttatgttgttatcgatccaggc
gaaacgccgcttgagaaaaagcaattgctttctgagaaagagtaccgcaactatcgcgag
aagtacggttcttcttttaccgctatgatgggcgcagaagcgattaagcgtctgcttgcg
gaaatcgaccttgataaagaagtggactgcttaaaagaggagctgaaatcagcgcaaggc
cagcgccggaaccgtgtgatcaagcggttggaagtattggaggcatttcgtaattctgga
aaccgtccagaatggatggtgttggatgtgttgccggttattccgccagaacttcgtccg
atggtgcaactggacggcggccgctttgcaacctccgatttgaacgatttgtatcgccgg
gttattaaccggaataaccgcttaaagcgtttgcttgatcttggtgcgccggatatcatt
gtacagaatgagaaacgtatgttacaggaagcggtagacgctctgatagacaatggccgt
cgcggccgtcctgtaaccgggccgggcaatcgtccgctgaagtctctcagccatatgctg
aaaggtaaacaggggcgttttcggcaaaacctgcttggtaagcgtgtggactactctggg
cgttccgttattgtcgtaggcccgcagttgaaaatgtaccagtgcggtttgccaaaagaa
atggcgctagaattgttcaagccttttgtcatgaaagagcttgtcgcaaaaggtcttgcg
cacaatattaaatctgcgaagcgtaaagtggaacgcgtgcatccggaagtctgggatgtt
ctcgaggatgtaatcaaagaacacccggttcttttaaatcgtgctcccacattgcataga
ctcggcattcaggcttttgaacccacgcttgttgaggggcgtgcgattcggttgcatccg
ctcgtatgtacggcatataatgccgactttgacggtgaccagatggctgtacacgttcca
ttgtctgcggaagcgcaggcggaagcgcgtctgctgatgcttgcggcgcagaacatcctt
aacccgaaagacggcaagccggttgttacgccgtcgcaggacatggtacttggcacgtac
tatctgacgatggaagataagacttctaaaggagaaggcaaagttttctccaatccgaat
caggcgatcgcggcttatgcgaatggacatattacacttcatgcgcgtatcgctctgccg
ccgaagagtctgaacaaaacttccttcacaccggaacaatttgcggctccgttgatggta
acaacggtcggaaaattaattttcaatgaaattttcccgcctgagctaccatatattaat
gagccgacgaaagaaaatcttcagaagaaagtgccggataagttctttatttttgaaaaa
ggtacgaacgtgcgcgaattcctagagaagttgcctgagcaagacgcggtcaaaaaaggg
tatctaggaacgattatcgctgaatgcttccgtcgcttcggcacgacgcagacatcgatc
atactcgacaaaattaaggagaatggttttaaatattccacgcaggctggtattactgtt
gctgttgccgacatcaaaactccgccagagaagcaacaaattctcgaagaagcggagaaa
aaagttcaatcggttatgcagcaatatcgtcgcggtttaattacagaaaacgagcgttac
gaccgcgttatcagcatctggagcaaagcaaaggacgatgttacgaaagtgcttatggcg
tcgcttgataagtttaacgccattaatatgatggcgacatccggcgcccgtggtaacgtg
tcacagattacacagcttgccggcatgcgcggtcttatggcaaacccgtccggccgtatc
atcgaacttccgatcaagtccaacttccgcgaaggcttaactgtattggagtactttatt
tccacacatggtgcgcggaaaggtttggcagacacagcgttgcgtacagctgactcaggt
tacttaacccgtcgcctcgtcgacgttgcacaggatgtgattgtccgtgaagaggattgt
ggtacggataaaggcgttgtggcaactgcgcttcgtgacgggaatgaaatcattgaggaa
ttgcaggatcgaattgttgggcgttattcgttccaaacagtgcgccatccagaaacaggg
gaaattattgtcggtcgaaatcagctcattgatgaaaaaattgcggaagaaattgtggcc
gcaggtattacggaggtcaatatccgttccgttatcggttgccgtacgcagcatggtgta
tgccggaaatgctacggtcgtaatctggcgacgggcaatgtagtggatatcggtgaatct
gttggtattatcgcggctcaatctatcggtgagccaggtacgcagttaacgatgcgtaca
ttccacaccggtggtgttgccggcgatgacattacgcaaggtcttccgcgtatccaggag
ttgtttgaggcccggaatccgaaaggccaggctgttattaccgaaattgaaggtgaagtt
atcgacattcgcgaaggcaaagatcggcgcgaagtcgaaattcgcggggaaaccgagaat
aaagtatatcaaattccttacggttcccgtttgaaagtgttcgttggttccaaagtggat
cttggtgaagaattaaccgaaggctccattgacccgaaagaaatgcttaagatccgcggt
atgcgtggcgttcaatactatattttgcaggaagtacagaaagtatatcgtatgcagggt
gtagaaattaacgacaagcatattgaggttatgattcgccagatgctgcgcaaagtgcgt
atcattgacagcggggatactgaactcttgccaggttcttatgtggaaatccatgagttc
gaagaggcgaataagaaagcgctctgggatggaaaacagcctgcagtggcacgtccggtg
ctgctcggtatcacaaaagcgtcgcttgagaccgattcattcctgtctgcagcatcgttc
caggaaacaacgcgtgtccttactgatgctgccattaaaggaaaagttgaccgcttgtta
ggtctgaaggaaaatgttattataggtaagctgttgcctgcgggcacaggtatgactcgc
tatcgcaacattgctttgaagcatgaactcatgccggctgaagaagttgcggaagaggca
cttgatgaaagtcagttgaaagatgttatactggaaaaatag
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