Amycolatopsis thermalba: L1857_03865
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Entry
L1857_03865 CDS
T08681
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
athm
Amycolatopsis thermalba
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
athm03021
]
L1857_03865
Transcription machinery [BR:
athm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L1857_03865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
MarR
MarR_2
KORA
HTH_24
HTH_31
HTH_IclR
HTH_Tnp_4
Sigma70_ECF
DUF7343
DUF134
HTH_26
GerE
HNF-1_N
HNH_repeat
Phage_antitermQ
Trp_repressor
Motif
Other DBs
NCBI-ProteinID:
UQS22019
LinkDB
All DBs
Position
complement(775527..776333)
Genome browser
AA seq
268 aa
AA seq
DB search
MTGSRTEPTKPTASNEYGHLAPLFDELAELSADDPRRAELRDELVTGHLPLAEHIAQRFS
GRGVAKEDLVQVATVGLINAVDRFDASRGSDFLSFAVPTVMGEVRRHFRDTGWLVRVPRR
LKELHLSISAASTELAQRLGRAPTPSEIASHLGVSQDEVYEGLEAGNAYHSMSLDEVLSG
DTENLALGDTLGEEDAGLEGVENHEALLPLIQELPERERKILGLRFVHNMTQTQIAERIG
VSQMHVSRLLARTLQRLRDGLTEPEGEA
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggttcccggacggagccgacaaaacccaccgcgtcgaacgaatacggccacctg
gccccgctgttcgacgagctggcggaactgtcggccgatgacccccgccgcgccgagctg
cgcgacgagctcgtcaccgggcacctgccgctggccgagcacatcgcgcagcggttctcc
gggcgcggggtggcgaaggaggacctggtccaagtcgccacggtcgggttgatcaacgcg
gtggaccggttcgacgccagccgcggctcggacttcctgtccttcgccgtgcccacggtg
atgggtgaggtgcgccgccacttccgggacacgggctggctggtgcgggtgccgcgccgg
ctcaaggagctgcatctgtcgatctcggcggcgagcaccgagctcgcgcagcggctgggt
cgcgcgcccacgccgagcgagatcgcgagccacctcggcgtcagccaggacgaggtctac
gagggcctggaagcgggcaacgcctaccactcgatgtcgctggacgaggtgctgtccggg
gacaccgagaacctcgcgctcggcgacacgctgggtgaggaggacgccgggctggagggt
gtggagaaccacgaggcgctgctgccgctgatccaggagctgcccgaacgggaacgcaag
atcctcggcctgcggttcgtgcacaacatgacgcagacccagatcgcggagcggatcggc
gtgtcgcagatgcacgtgtcccggctgctcgcccgcaccctgcagcggctgcgcgacggc
ctcaccgagccggagggagaggcttga
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