Amycolatopsis thermalba: L1857_06360
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Entry
L1857_06360 CDS
T08681
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
athm
Amycolatopsis thermalba
Pathway
athm03420
Nucleotide excision repair
athm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L1857_06360 (pcrA)
03430 Mismatch repair
L1857_06360 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
athm03400
]
L1857_06360 (pcrA)
Enzymes [BR:
athm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1857_06360 (pcrA)
DNA repair and recombination proteins [BR:
athm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L1857_06360 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
L1857_06360 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
UQS22470
UniProt:
A0ABY4NP54
LinkDB
All DBs
Position
1287891..1290296
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AA seq
801 aa
AA seq
DB search
MSTLFDLPAEPPARPAPGRHADLLADLNPAQREAVTHAGAPLLVVAGAGSGKTRVLTRRI
AYLLAERGVHPGEIMAITFTNKAAAEMRERVSELVGRRANAMWVSTFHSMCVRLLRREAK
TLDMSSNFSIYDADDTRRLVTLVARDLDIDPKRYPARALAVHISNHKNELADPEDATAKA
SNDLERRVAEVYTEYQRRLRLANAFDFDDLIMRTVELFQTFPDVAEHYRRRFRHVLVDEY
QDTNHAQYTLVRELVGTATSESGVEPAELCVVGDADQSIYAFRGATIRNIEEFERDFPDA
RTILLEQNYRSTQTILSAANAVIARNPNRRDKRLWTDSGDGEKIGVYVADNEHDEAAFVA
GEIDALVDQGQAKYSDVAVFYRTNNQSRVFEEIFIRLGLPYRVVGGVRFYERREVRDALA
YLRVLANPEDTVSLRRILNVPKRGIGERAEACVATHAERERISFAAALRDAAAGRVALLN
PRSAKAIAGFVELLDGLIELVDGGAEVADVLEAVLERTGYRAELEESDDPQDASRVDNLT
ELITVAREFAEQAAEMAPLAEDDAGVPEPGSLPAFLERVSLVADADSVPSPDEDGAEEDS
GVVTLMTVHTAKGLEYPVVFCTGWEDGVFPHLRALGEPAELAEERRLAYVAITRARQRLY
LSRAITRSAWGQPMTNPASRFFDEVPAELLDWRREEPSSAAEPSFGSPRAATTWGRRSRF
GEDSAQAGIAARGMRSTPFKGWQNTVALKLEVGDRVNHDKYGLGTVVEASGEGPRATATI
DFGSAGKVKLMLIGSVPMVKL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccctgttcgacctccccgccgagccgcccgcgcgccccgcgccgggccgccac
gccgacctgctcgccgacctcaaccccgcgcagcgggaggcggtcacgcacgccggggcg
ccgctgctggtcgtcgcgggcgccgggtcgggcaagacccgggtgctgacccgccggatc
gcctacctgctggccgagcgcggcgtgcaccccggcgagatcatggcgatcacgttcacc
aacaaggccgcggccgagatgcgcgagcgcgtcagcgaactggtcggcaggcgggcgaac
gcgatgtgggtctccacgttccactcgatgtgcgtgcggttgctgcgccgcgaggccaag
acgctggacatgtcgtcgaacttctcgatctacgacgccgacgacacccggcgcctggtc
acgctcgtggcgcgcgacctggacatcgaccccaagcgctacccggcccgcgcgctggcc
gtgcacatctccaaccacaagaacgagctggccgacccggaggacgccaccgcgaaggcg
tccaacgacctggagcgccgcgtcgccgaggtctacaccgagtaccagcggcggctccgg
ctggccaacgcgttcgacttcgacgacctgatcatgcgcacggtcgagctgttccagacc
ttccccgacgtggccgagcactaccgccgccggttccggcacgtcctggtcgacgagtac
caggacaccaaccacgcccagtacacgctggtgcgggagctggtcggcaccgcgaccagc
gagtccggcgtcgagccggccgagctgtgcgtggtcggtgacgccgaccagtcgatctac
gccttccgcggcgccacgatccgcaacatcgaggagttcgagcgggacttcccggacgcc
cgcacgatcctgctggagcagaactaccgctccacccagaccatcctgtccgcggccaac
gcggtcatcgcgcgcaacccgaaccggcgggacaagcggctgtggaccgactccggcgac
ggcgagaagatcggcgtgtacgtcgccgacaacgagcacgacgaggcggccttcgtcgcg
ggcgagatcgacgcgctggtcgaccagggccaggcgaagtactccgacgtcgcggtcttc
taccgcacgaacaaccagtcgcgggtgttcgaggagatcttcatccggctcgggctgccc
taccgggtggtcggcggcgtccggttctacgagcggcgcgaggtgcgggacgcgctggcc
tacctgcgggtgctggccaacccggaggacacggtcagcctgcggcggatcctgaacgtg
cccaagcggggcatcggcgagcgggccgaggcgtgcgtggccacgcacgccgagcgcgag
cggatctccttcgcggccgcgttgcgcgacgccgcggcgggccgggtggcgctgctcaac
ccgcggtcggccaaggcgatcgccgggttcgtggagctgctcgacgggttgatcgagctg
gtcgacggtggcgccgaggtcgcggacgtgctggaagccgtgctggagcgcaccgggtac
cgggccgagctggaggagtccgacgacccgcaggacgcctcgcgggtggacaacctgacc
gagctgatcacggtcgcgcgcgagttcgcggagcaggcggccgagatggcgccgctcgcc
gaggacgacgccggggtgcccgaaccgggctcgctgcccgcgttcctggagcgggtgtcg
ctggtcgcggacgcggattcggtgccgagcccggacgaggacggtgcggaagaggactcg
ggcgtggtcacgctgatgaccgtgcacaccgccaaggggctggagtacccggtggtgttc
tgcacgggctgggaggacggtgtcttcccgcacctgcgtgcgctgggcgagccggccgag
ctggcggaggaacggcggctggcgtacgtggcgatcacgcgggcgcggcagcggctgtac
ctgagccgggcgatcacccggtcggcgtgggggcagccgatgacgaacccggcgtcccgg
ttcttcgacgaggtgcccgccgagctgctcgactggcgccgcgaggagccgtcgtcggcc
gccgagccgtccttcggctcaccgcgcgccgcgacgacgtggggacggcggtcgcgcttc
ggcgaggactccgcgcaggccggcatcgcggcccgcggcatgcggtcgacgccgttcaag
ggctggcagaacacggtcgcgctgaagctcgaggtgggcgaccgggtcaaccacgacaag
tacggactgggcacggtggtcgaagcctccggcgagggcccccgcgccacggcgacgatc
gatttcggcagtgccggcaaggtgaagctgatgctgatcggcagcgtgccgatggtgaag
ctgtag
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