Amycolatopsis thermalba: L1857_06565
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Entry
L1857_06565 CDS
T08681
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
athm
Amycolatopsis thermalba
Pathway
athm00020
Citrate cycle (TCA cycle)
athm00190
Oxidative phosphorylation
athm00650
Butanoate metabolism
athm00720
Other carbon fixation pathways
athm01100
Metabolic pathways
athm01110
Biosynthesis of secondary metabolites
athm01120
Microbial metabolism in diverse environments
athm01200
Carbon metabolism
Module
athm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
athm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
athm_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
L1857_06565 (sdhA)
00650 Butanoate metabolism
L1857_06565 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
L1857_06565 (sdhA)
00720 Other carbon fixation pathways
L1857_06565 (sdhA)
Enzymes [BR:
athm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
L1857_06565 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
Thi4
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
UQS22508
UniProt:
A0ABY4NQY0
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All DBs
Position
complement(1330707..1332494)
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AA seq
595 aa
AA seq
DB search
MQFHKYDVVIVGAGGAGMRAAIESGQRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLTDQDAAEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKAAVRRACYAADRTGHMILQTLYQNCVKHGIEFFNEFYVLDMITTETENGPVATGA
VAYELATGEIHVFQAKAVVFATGGFGKVFKTTSNAHTLTGDGMGIYYRKGLPLEDIEFYQ
FHPTGLAGLGILLTEGARGEGAILRNASGERFMERYAPTIKDLAPRDIVARSMVLEVLEG
RGAGPHKDYVLLDCTHLGAEVLETKLPDITEFARTYLGVDPVKEPVPVYPTAHYAMGGIP
TNVHGEALLDNDTVLPGAYAAGEVACVSVHGANRLGTNSLLDINVFGRRAGIAAAEYALG
HDFVELPENPAKMVEGMVDHLRTAHGGERVTDIRTELQQTMDTNAAVYRTEDTLKTALTD
VQRLKERYGRISIQDKGKRYNTDLLEAIELGFLLDLAEALVNAALARKESRGGHAREDYP
NRDDVNFMRHSMSYKILPDKPDPDAPLGINGFMADIRLDYKPVTFTRYEPMERKY
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcagttccacaagtacgacgtggtgatcgtgggcgccggtggcgccggtatgcgcgcc
gccatcgagtcgggccagcgcgcccgcaccgcggtcctcaccaagctctacccgacccgc
tcccacaccggcgcggcccagggcggcatgtgcgccgcgctggccaacgtcgaagaggac
aactgggagtggcacaccttcgacacggtcaagggcggcgactacctgaccgaccaggac
gcggcggagatcatggccaaggaggccatcgacgccgtgctcgacctggagaagatgggc
ctgccgttcaaccggacgccggaaggcaagatcgaccagcgccggttcggcgggcacacc
cgtgaccacggcaaggccgcggtgcgccgggcctgctacgcggccgaccgcaccggtcac
atgatcctgcagacgctgtaccagaactgcgtcaagcacgggatcgagttcttcaacgag
ttctacgtgctcgacatgatcaccaccgagaccgagaacgggcccgtcgccaccggcgcc
gtcgcctacgaactcgcgaccggcgagatccacgtctttcaggcgaaggcggtcgtgttc
gccaccggtggcttcggcaaggtcttcaagaccacgtcgaacgcgcacaccctcaccggt
gacggcatgggcatctactaccgcaagggcctgccgctggaggacatcgagttctaccag
ttccacccgaccggcctggccggcctcggcatcctgctcaccgagggcgcccgcggcgag
ggcgcgatcctgcgcaacgcctcgggtgagcggttcatggagcgctacgccccgaccatc
aaggacctcgcgccgcgggacatcgtcgcccggtcgatggtcctggaggtgctggagggc
cgcggcgccggcccgcacaaggactacgtgctcctggactgcacgcacctcggcgcggag
gtcctggagaccaagctgccggacatcaccgagttcgcccgcacctacctgggcgtggac
ccggtgaaggagccggtgccggtgtacccgaccgcgcactacgcgatgggcggcatcccg
acgaacgtgcacggcgaggccctgctcgacaacgacaccgtcctgcccggcgcttacgcc
gccggtgaggtcgcgtgcgtgtcggtgcacggcgcgaaccggctgggcaccaactcgctg
ctggacatcaacgtgttcggccgccgcgccggcatcgccgccgccgagtacgccctgggc
cacgacttcgtcgagctgccggagaacccggccaagatggtcgagggcatggtcgaccac
ctgcgcaccgcgcacggtggcgagcgggtcaccgacatccgcaccgagctgcagcagacc
atggacaccaacgcggccgtgtaccgcaccgaggacacgctgaagaccgcgctgaccgac
gtccagcggctcaaggagcgctacggccggatctcgatccaggacaagggcaagcggtac
aacaccgacctgctcgaggcgatcgagctgggcttcctgctcgacctggccgaggccctg
gtcaacgccgccctggcgcgcaaggagtcccgcggcgggcacgcccgcgaggactacccg
aaccgggacgacgtcaacttcatgcggcactcgatgtcgtacaagattctgccggacaag
ccagacccggacgccccgctgggcatcaacgggttcatggccgacatccggctggactac
aagccggtgaccttcacccggtacgagccgatggagcggaagtactga
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