Amycolatopsis thermalba: L1857_07120
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Entry
L1857_07120 CDS
T08681
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
athm
Amycolatopsis thermalba
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
UQS22606
UniProt:
A0ABY4NRD2
LinkDB
All DBs
Position
complement(1444175..1446292)
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AA seq
705 aa
AA seq
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MSTLSADFEGKSDAELITDVRTGTLAAYGTLYERHVSAAYNLARQLARSTAEADDLVSDA
FAKVLDTLRAGKGPDSAFRAYLLTALRHTAYDKTRKDKRVDLNEDMTTVSAEALTVQFSD
TAVAGLERTMAAKAFASLPERWQAVLWHTEIEQQSPAEVAPLLGLTPNGVSALAYRAREG
LRQAYLQVHLAETSADKCRACADRLGAWTRDGLSKRERAQVEAHLDECADCRALAAELAE
VNGALRAIIAPIVLGGAALGYLATAGKATAATVATAGAAAGSAGGAASVAAAGPRQFVGV
GVSGVAVAAAVAAALAAGGGTQEIPAAASAPAPPPAVAPAQPPAPPAAPPAAPPPAPVVE
PAPAPVAPPAPGPAPAPPPPAPGAPANITAEGPSSALELEPGGDPVALPITVRNNGGSVS
DPVAATLNLPPGIRVVPAGGGGGGAGGFGTQAAPGPLLVNCPPGEGTVTCTTPRGLRPGE
SAVLTFLLKAEQGAASGQVTGSVNAGSNVRVSVSVPVSVAEAPDQVALEAKAVRSGQHVW
GRSVWLSVDVTNTGPNTKPVTLSIDDEARLILGSFRAACDSGPTTTCTSLNALEPGEHLR
LWFELDGPEKQARTVTVSATLGTAHASQTVTFDCWFPHCGVPLPGLAPTTTTTTSVTPSP
STTTTTTSRETTTTTTTTSSRTTTTTTTTSKDHGRPWWWLPWIPY
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccctttcggccgatttcgagggcaagagcgacgcggagctgatcaccgacgtc
cgcaccggcaccctggccgcgtacggcacgctctacgaacggcacgtcagcgcggcctac
aacctggcgcggcagctcgcccggtccaccgccgaggccgacgacctggtctccgacgcg
ttcgcgaaggtcctcgacacgctgcgcgcaggcaagggcccggacagcgccttccgcgcg
tacctgctcaccgcgctccggcacaccgcctacgacaagacccgcaaggacaagcgcgtc
gacctcaacgaggacatgaccacggtcagcgcggaggcgctgaccgtgcagttctccgac
accgccgtggccgggctggagcggacgatggcggcgaaggcgttcgcgtcgctgcccgag
cgctggcaggccgtgctgtggcacaccgagatcgagcagcagagcccggccgaggtcgcg
ccgctgctcggcctgacgcccaacggcgtgtccgcactcgcctaccgggcccgtgagggc
ctgcggcaggcgtacctgcaggtccacctggccgagacgtccgccgacaagtgccgcgca
tgcgccgaccggctcggcgcgtggacccgcgacggcctgtccaagcgggaacgcgcccag
gtcgaggcgcacctggacgagtgcgcggactgccgggcgctggccgccgagctggccgag
gtcaacggcgcgctgcgggcgatcatcgcgccgatcgtgctgggtggcgcggcgctgggc
tacctcgcgaccgcgggcaaggcgacggccgcgacggtggcgaccgccggtgccgcggcc
gggtccgcgggtggtgcggcttccgtcgcggccgccgggccgcggcagttcgtcggggtc
ggcgtgtccggtgtcgcggtggccgccgcggtcgccgccgcgctggccgcgggtggtggc
acgcaggagatcccggcggccgcgtcggctccggcgccaccgccggcggtcgcgcccgcg
cagcccccggccccgcccgccgctccgccggccgcgccgccaccggctccggtcgtcgaa
ccggcccccgcgcccgtcgcgcccccggcgcccgggccggccccggcgccaccgccgccg
gcgcccggcgcgcccgcgaacatcaccgccgagggaccgtcctcggcgctcgaactggaa
ccgggcggtgacccggtcgccctgccgatcacggtgcgcaacaacggcggatcggtgtcg
gacccggtcgcggcgacgttgaacctgccgcccggcatccgggtggtgccggcgggcggc
ggtggcggcggcgccggtggattcgggacgcaggccgcgcccgggccgctgctggtgaac
tgcccgccgggcgagggcacggtcacctgcaccaccccgcgcgggttgcggccgggtgag
agcgcggtgctgacgttcctgctcaaggcggagcagggtgcggcgtcgggccaggtcacc
ggttcggtgaacgccgggtcgaacgtccgggtgtcggtcagcgtgccggtgtccgtggcc
gaggcgccggaccaggtggcgctggaggcgaaggccgtgcggagcggccagcacgtgtgg
ggccgctcggtgtggctgtcggtcgacgtgaccaacaccggcccgaacaccaagccggtc
accctctcgatcgacgacgaggcgcggctgatcctgggcagcttccgggcggcgtgcgac
agcggcccgacgaccacgtgcaccagcctgaacgcgctggagccgggcgagcacctgcgg
ctgtggttcgagctggacgggccggagaagcaggcccggaccgtgacggtgtcggcgacg
ctgggcaccgcgcacgcgtcgcagacggtgacgttcgactgctggttcccgcactgcggg
gtgccgttgccgggcctggcgccgaccacgacgaccaccacttcggtgaccccgtcgccg
tccaccacgaccaccacgacctcgcgcgaaacgaccaccaccacgacgacgacctccagc
cgcacgaccacgacgacgaccacgacgtcgaaggaccacgggcggccgtggtggtggctg
ccctggatcccgtactga
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