Amycolatopsis thermalba: L1857_09000
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Entry
L1857_09000 CDS
T08681
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
athm
Amycolatopsis thermalba
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
athm03032
]
L1857_09000
03400 DNA repair and recombination proteins [BR:
athm03400
]
L1857_09000
Enzymes [BR:
athm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
L1857_09000
DNA replication proteins [BR:
athm03032
]
Prokaryotic type
DNA Topoisomerases
L1857_09000
DNA repair and recombination proteins [BR:
athm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L1857_09000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
UQS22945
LinkDB
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Position
1835097..1837586
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AA seq
829 aa
AA seq
DB search
MARRSKTAVTRVDPAAFDQAGAQVFENPVKTEIEDSYLEYAYSVIHSRALPDARDGLKPV
HRRILFAMNEAGYRPSHAYVKSSRVVGDVMGRYHPHGDTAIYDAMVRLAQDFSMNAPLID
GHGNFGSPDDGPAASRYTEARMSPEAMLLVGELGEETVDFRPNYDGSLMEPSVLPAAYPN
LLVNGTSGIAVGMATNMIPHNMGEVIAAARWLINHPAATLDKLMEFVPGPDLPTGGMLLG
LDEVRKAYETGRGVVRMRAKVEIGPLPGSRGRQAITVTELPYGVGPEKVIEKITEEVNKS
KRLTGIADVKDLTDRENGTRLVIECKVGVNPQPLLADLYRLTPLEQSFGINNLVLVDGQP
QTLGLKQLLEVFLDHRYEVVTRRTKYRRRKREERLHLVEGLLIALLDIDKVIRLIRNSDD
AAQAKDGLMKRFKLSEIQATYILDTPLRRLTKYDKLELEDEQEKLRAEIAELTRILEDDK
ELKKVVSAELAKIARDFKTERRTALIDGDLKEVLAASKPAGPLEVADDPCQVILSATGLV
ARTAAESEEAPEGRRRNGRVKHDAVAAMVHSTARGQVLLVTSRGRAFKTDVLPLPVLPEQ
SGTVSLRGGMAARELVPLDKGEKVIGIAPLGEQAAGSPGLALGTRQGVVKVVAPDWPVRS
DEFEIIGLKDGDEVVGAVWLADGEETFAFLSSDASLLRFPASLVRPQGLKGGGMAGIKLA
GDAEVVFFGAIRTDDAEHGDPMVVTATGASVKMTPFAEYPAKGRATGGVRAHRFLKGETR
LTVGWVGPRPAAASKTGDPVELPEPTPRRDASGAPHPGPDVVGHLIERS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccgatccaaaaccgccgtgacccgggtcgatccggccgcgttcgaccaggcg
ggcgcgcaggtcttcgagaacccggtcaagaccgagatcgaggactcctacctggagtac
gcctactcggtcatccactcccgggcgctgcccgacgcgcgggacggcctgaagccggtg
caccgccggatcctgttcgccatgaacgaggccggctaccggcccagccacgcgtacgtg
aagtcctcgcgcgtggtcggcgacgtgatgggccgctaccacccgcacggcgacacggcg
atctacgacgcgatggtccgcctggcgcaggacttctcgatgaacgcgccgctcatcgac
gggcacggcaacttcggttcgccggacgacggcccggccgcgtcccggtacaccgaggcc
cgcatgtcgcccgaggcgatgctgctcgtcggtgagctgggtgaggagacggtcgacttc
cggccgaactacgacggttcgctgatggagccgtcggtgctgcccgccgcgtacccgaac
ctgctggtcaacggcacgtcgggcatcgcggtcgggatggcgaccaacatgatcccgcac
aacatgggcgaggtcatcgcggccgcgcggtggctgatcaaccacccggccgcgacgctg
gacaagctgatggagttcgtgccgggccccgacctgccgaccggcgggatgctgctgggc
ctggacgaggtgcgcaaggcgtacgagaccggccgcggcgtggtccgcatgcgcgccaag
gtcgagatcggcccgctgcccggcagccgcggccgccaggcgatcacggtcaccgagctg
ccctacggcgtcgggccggagaaggtgatcgagaagatcaccgaggaggtcaacaagtcc
aagcggctcaccgggatcgccgacgtcaaggacctcaccgaccgcgagaacggcacgcgg
ctggtcatcgagtgcaaggtgggcgtcaacccgcagccgctgctggccgacctgtaccgg
ctcacgccgctggagcagtcgttcggcatcaacaacctcgtgctcgtcgacggccagccg
cagacgctggggctcaagcagctgctcgaggtgttcctggaccaccgctacgaggtggtc
acgcggcgcacgaagtaccgccgccgcaagcgcgaggaacggctgcacctggtcgagggt
ctgctgatcgcgttgctggacatcgacaaggtgatccggctgatccgcaacagcgacgac
gccgcgcaggccaaggacggcctgatgaagcggttcaagctgtccgagatccaggccacc
tacatcctggacacgccgctgcgccggctcaccaagtacgacaagctcgaactcgaggac
gagcaggagaagctacgcgccgagatcgccgagctgaccaggatcctcgaggacgacaag
gaactgaagaaggtcgtctcggccgagctggccaagatcgccagggacttcaagaccgag
cggcgcaccgcgctgatcgacggtgacctcaaggaggtgctggccgcgtcgaagccggcc
ggtccgctggaggtcgccgacgacccgtgccaggtgatcctgtccgccaccgggctggtg
gcgcgcacggcggcggagtcggaggaggcgccggagggccgccgccgcaacggccgggtg
aagcacgacgcggtcgcggcgatggtgcactcgacggcgcgcggccaggtcctgctggtc
accagccggggccgcgccttcaagacggacgtgctgccgttgccggtgctgccggagcag
agcggcacggtgtcgctgcgcggtgggatggccgcgcgcgagctggtgccgctggacaag
ggcgagaaggtcatcgggatcgcgccgctgggtgagcaggccgccgggtcgccggggctc
gcgctcggcacgcggcagggcgtggtgaaggtggtggcgccggactggccggtgcgctcg
gacgagttcgagatcatcgggttgaaggacggcgacgaggtggtcggcgcggtgtggctg
gccgacggcgaggagacgttcgcgttcctgtcctcggacgcgtcgctgctgcggttcccg
gcttcgctggtgcggccgcaggggttgaagggcggcggcatggcgggcatcaagctcgcc
ggtgacgccgaggtggtgttcttcggggcgatccggacggacgacgcggagcacggcgac
ccgatggtggtgacggccacgggggcgagcgtgaagatgacgccgttcgccgagtacccg
gcgaagggccgcgcgaccggcggtgtgcgggcgcaccgcttcctgaagggggagacgcgg
ctgacggtcggctgggtcggcccacgcccagccgcggcgtcgaagaccggcgacccggtg
gaactcccggagcccaccccccgccgcgacgcctcgggcgccccccaccccggcccggac
gtggtaggccacctgatcgaacgcagctga
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