Amycolatopsis thermalba: L1857_11635
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Entry
L1857_11635 CDS
T08681
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
athm
Amycolatopsis thermalba
Pathway
athm03030
DNA replication
athm03430
Mismatch repair
athm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L1857_11635 (holA)
03430 Mismatch repair
L1857_11635 (holA)
03440 Homologous recombination
L1857_11635 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
athm03032
]
L1857_11635 (holA)
03400 DNA repair and recombination proteins [BR:
athm03400
]
L1857_11635 (holA)
Enzymes [BR:
athm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L1857_11635 (holA)
DNA replication proteins [BR:
athm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L1857_11635 (holA)
DNA repair and recombination proteins [BR:
athm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L1857_11635 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DUF6907
DNA_pol3_gamma3
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
UQS23428
UniProt:
A0ABY4NTP6
LinkDB
All DBs
Position
2359394..2360374
Genome browser
AA seq
326 aa
AA seq
DB search
MTAPATTSAPLQLVLGEEELLVERAVRGALGQARREDPTAEMTKVRVPDLTPPALAELVS
PSLFSEGRVIVLEGAQDIGQELADAVLAYAKMPADGVVLVVVHTGGGRSKAAKSLPAALR
KAGAQVTECPKITRPADRESFVRNEVRQAGGKIDPAGVAALIDAVGSDLRELAAAASQLV
ADSGGRVDEEAVRRYHRGRADVTGFAVAEKAVAGERGAALEAMRWALQIGVAHVLIADAL
ADAVRTIARVSAAGRGNPNQMAGELGMPPWKIRKAQGQSRGWTQAGLAEAMAVVARVNAE
VKGQAADPAYALERAVLELAAARDKR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgccggcaaccacctccgcccccctgcagctcgtgctcggcgaagaggagctg
ctcgtcgagcgcgccgtccggggcgctctcggtcaggcccgccgggaggacccaacggcc
gagatgaccaaggtccgcgtgcccgatctcacaccgcccgccctcgccgagctggtcagc
ccgtcgctgttcagcgaggggcgggtcatcgtgctggagggcgcgcaggacatcggccag
gagctggccgatgcggtgctggcctacgcgaagatgccggccgacggggtcgtcctcgtc
gtcgtgcacaccgggggcggacgcagcaaggcggccaagtccctgcccgcggcgctgcgc
aaggccggtgcgcaggtcaccgagtgcccgaagatcacccggccggcggatcgcgagtcg
ttcgtccgcaacgaggtccggcaggccggtgggaagatcgacccggcgggtgtcgcggcg
ctgatcgacgccgtcggatccgacctgcgggagctggccgcggccgcgtcgcagctggtg
gcggactccggcgggcgggtcgacgaggaggccgtgcgccgctaccaccgcggccgagcg
gacgtaaccggcttcgccgtggcggagaaggccgtcgcgggggagcgcggcgcggcgctg
gaggcgatgcggtgggcgctgcagatcggcgtggcgcacgtcctgatcgccgacgccctc
gccgacgcggtgcgcaccatcgcgcgggtgtcggcggcggggcgcggcaacccgaaccag
atggccggtgagctgggcatgccgccgtggaagatccgcaaggcgcagggacagtcccgc
gggtggacacaggccggcctcgccgaggcgatggcggtggtggcgagggtgaacgccgag
gtcaagggccaggccgcggacccggcctacgcgctggagcgggcagtcctggaactcgcc
gccgcccgcgacaagcgctga
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