Amycolatopsis thermalba: L1857_14775
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Entry
L1857_14775 CDS
T08681
Name
(GenBank) NB-ARC domain-containing protein
Organism
athm
Amycolatopsis thermalba
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NB-ARC
ANAPC4_WD40
APAF1_C
Ge1_WD40
WDR54
PROPPIN
Nbas_N
Motif
Other DBs
NCBI-ProteinID:
UQS24004
LinkDB
All DBs
Position
complement(3059567..3063085)
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AA seq
1172 aa
AA seq
DB search
MRSRRTQVAAAMSVTALNVAVAITVNVLTSGWSWLVFVLLAVLSAGWIAIEAWRAVPRRR
KDGSPGAPVPPGPGIFVARPELAGPIVRALLTSRSRKVGITTGLAGAGGFGKTTLAAAVC
ARPDVRAAFDWIDWVTVGQEVRGAALADAINDISERLDGQRPGLTSPEQAGIRLGELLRE
KGRALLVVDDVWTAGQLRPFLNAARGCTLLVTTRIPDLLPGDAETVEVDQMSRQQARLLL
SSGVGGLPEAIADQLLDITGRWPLALGLANGALRRAVRDGADVTATAERLLARLRDRGPA
ALDVTDAARRDRAVAATLESSLGVLGDQRERVVELAIFPEDTEIPVDLLVRYWQQTAGLP
PAECDRLYHELAELSLIIPGGTGLRMHDVIRTYLRHECGPDRLGKLHTALLDAAAALARD
GADPVPWWNLPAGAEYLWRSLAYHLDGAGRSAELTALVTTPRWVIRKLVAFGPVAVAEDL
AFADTPPARTLRRFLDQQAHLLIPGQPEHAVVNALAHRLPPVAELRELRMATLAEVEGRP
RLVPQGDLPDLPHPALIRVLTGHDGWVRECAFTGDGGALVSAAGDGFRVWNPETGELIRL
IEDRELGFRSAFALSPDGGLLAGAGAEPEILVWDTRTWEVRARLPARGGEITALCFSGEG
TNIVHQTGDRTVHVTEIATGRHLRLVRAEEVLDDAVGLPGGDLLVRYGATLEIWPATQDG
RTRLQPTDPLSPRGLAVSGDGRWAAVTGDDGVLLYDLRNPVAPPRLLGHARELRAAVFSP
DGGTLATGSVSGRIVLWDLASARPRGAIQAHASEINDLSFAPDSSALASAGDDGTVRLWD
PAGTPAGPGDGTATVADRCAFAADGSWLAVASGNTLTIRDPESGEVVDELTESSVFGLAA
VGSDRLAVERVDSILVRDAGNWRSCRALRPPSDGYLSEVTTGGALVAATDGDGQILVWDT
RTWAPPVVLTAREASVHLGAPRASPARRAVNRLDQRLRRRYRRRIHPFRRVIGRLATPAP
LVRLVIAPDSAWIAVAVGAAVHVVDARTWQSTATLSFDEEPEGMRVPSHGDWLVVAAGDR
ISYWSTRSWTKESELVAPDIVGAAGGDWSPDGSLLATVSPDDQALVRIQHSRDGTCRTEL
RLDGEAATCKWLSADRLAIVGGRGIYTFDYLR
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
ttgaggtcgaggcgcacgcaggtcgcggcggcgatgtcggtcaccgcgttgaacgtcgcg
gtcgcgatcacggtcaacgtgctcacctcgggctggagctggctggtcttcgtgctgctc
gcggtgctgtcggccggctggatcgcgatcgaggcctggcgcgcggtgccccgccgccgg
aaggacggctcgcccggcgcgccggtgccgcctgggccgggaatcttcgtcgcgcgcccc
gagctggccgggccgatcgtgcgtgcgctgctgaccagccgcagccgcaaggtcgggatc
accaccggccttgcgggcgcgggcggcttcggcaagacgacgctcgccgccgccgtgtgc
gcccggccggacgtgcgagccgcgttcgactggatcgactgggtcacggtcggccaggag
gtgcggggcgccgcgctcgccgacgcgatcaacgacatcagtgagcgcctcgacgggcag
cggcccggcctgaccagcccggaacaggccggcatccggctcggtgagctgctccgggag
aaaggccgggcgctgctcgtcgtcgacgacgtgtggacggccgggcagctccgcccgttc
ctcaacgccgcacgcggctgcacgctcctggtgacgacgcggatccccgacctgctgccc
ggcgacgcggaaaccgtcgaggtcgaccagatgagccggcagcaggcgcggctcctgctg
agcagcggtgtcggcgggcttcccgaggcgatcgccgaccagctgctcgacatcaccggg
cggtggccgctcgcgctgggcctcgccaacggcgccttgcgccgcgcggtgcgggacggc
gcagacgtgaccgcgacagcggaacggctgctcgcgcggttgcgcgaccgcggcccggcc
gcgctggacgtgaccgacgcggcccgccgcgaccgcgccgtcgcggcgacgctcgaatcg
tcgctcggtgtgctcggcgaccagcgcgagcgcgtcgtggaactcgcgatcttcccggag
gacaccgagatcccggtggacctcctcgtccgctactggcagcagaccgccggactgcca
cccgccgagtgcgaccggctctaccacgagctggccgaactgtcgctgatcatccccggc
gggaccgggctgcggatgcacgacgtcatccgcacctacctgcgccacgagtgcggcccg
gaccggctcggcaaactccacaccgccttgctcgacgcggccgccgcgctcgcccgggac
ggcgcggatcccgtcccgtggtggaacctgcccgccggcgccgagtacctgtggcgctcg
ctggcctaccacctcgacggcgccgggcggagcgccgagctgaccgcgctcgtcaccaca
ccgcggtgggtcatccggaagctggtcgccttcgggcccgtcgcggtggccgaagacctc
gcgttcgcggacacgccgccggcccggaccctgcgcaggttcctggaccagcaggcgcac
ctgctcatccccgggcagccggagcacgcggtggtcaacgcgctcgcccaccgtctgcca
ccggtggccgagctgcgggaactccggatggccacgctggccgaggtcgagggccgcccg
cgcctggttccccagggcgacctgccggacctgccccaccccgcgttgatccgggtcctc
accggacacgacggctgggtccgtgaatgcgctttcaccggcgacggcggcgcgctggtg
tcggccgccggcgacggttttcgcgtgtggaacccggagaccggcgagctgatccggttg
atcgaagaccgcgagctgggctttcgcagcgcgttcgccctgtccccggacggcggcctg
ctcgcgggtgcgggcgcggagccggagatcctcgtgtgggacacccgtacctgggaagtg
cgggcgcggctgcccgcgcgcggtggcgagatcaccgcgctgtgcttctccggcgagggc
acgaacatcgtccaccagaccggcgaccggaccgtccacgtcaccgagatcgccaccgga
cgtcacctgcggttggtcagggccgaggaggtcctggacgacgcagtcgggctgcccggc
ggcgacctgctcgtgcgctacggggccacgctggagatctggccggcgacgcaggacggg
cggacccggctgcagcccacggatccgctgtccccgcgcggtctcgccgtcagcggagac
ggccggtgggccgccgtcaccggcgacgacggtgtgctgctctacgacctgcgaaacccc
gtcgcgcctccgcggttgctcggtcacgcccgcgagctgcgggcagccgtgttctccccc
gacggcggcacgctcgccaccgggagcgtgagcggccggatcgtcctgtgggacctggcg
agcgcccggccccgtggcgccatccaggcgcacgcgtccgaaatcaacgatctgtccttc
gcgccggacagctccgccctggcctcggccggggacgacggcaccgtccggctgtgggac
ccggcgggcaccccggccggtccgggcgacggcacggcgaccgtggccgaccggtgcgct
ttcgcggcggacgggtcgtggctggcggtcgcgagcggcaacaccctcacgatccgcgac
cccgagtccggagaggtggtcgacgagctgaccgaatcgagcgtcttcggcctcgccgcc
gtcggcagcgaccggctcgccgtggagcgggtcgactcgatcctggttcgtgacgcgggg
aactggcgcagctgccgcgcgctccggcccccgtcggacggttacctcagcgaggtcacc
acgggaggtgcgctcgtggcggcgaccgacggcgacgggcagatcctggtgtgggacacc
aggacctgggcaccgccggtcgtgctgaccgcccgcgaagcgagtgtccacctcggtgct
ccccgcgcctcgccggcccggcgggcggtcaaccgcctcgaccagcggctgcggcggcgg
taccggcggcggattcaccccttccgccgggtgatcgggcggctggccacgcccgcgccg
ctcgtgcggctcgtgatcgcgccggactccgcctggatcgcggtggcggtcggggcggcc
gtccacgtcgtggacgcgcgcacgtggcagtccaccgcgacgctctcgttcgacgaggag
cccgagggcatgcgggtgccctcgcacggggactggctggtggtggctgccggggaccgg
atcagctactggagcacgcggtcctggacgaaggagtccgaactggtcgcgccggacatc
gtcggcgccgcgggcggggactggtcgccggacggctcgctgctcgcgacggtgtcgccg
gacgatcaggcgctggtgcggatccagcacagccgggacggcacgtgccgcaccgaactg
cgcctcgacggggaggcggccacgtgcaagtggctgagcgccgaccggctggcgatcgtg
ggcgggcggggcatctacaccttcgactacctgcggtga
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