Amycolatopsis thermalba: L1857_15045
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Entry
L1857_15045 CDS
T08681
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
athm
Amycolatopsis thermalba
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
athm03016
]
L1857_15045 (thpR)
Enzymes [BR:
athm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
L1857_15045 (thpR)
Transfer RNA biogenesis [BR:
athm03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
L1857_15045 (thpR)
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
UQS24050
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All DBs
Position
3114386..3114889
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AA seq
167 aa
AA seq
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MVLFSAVLPPADVVATLTAEIGGLPELDGVRWSSPDNWHVTLGFYGEEDPAERAGWLRPR
LAGMPAPRIWLEGAGTFTRVLYLGVYGEGITELGLAAGAGDEGRPYLPHLTLARTRERVP
PELARRLSGYRSRMWTAAEAVLMRSQRTAGGVRYAVVERFPLSQQAR
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
gtggtgctgttctcggcggtcctgccgcccgccgacgtggtggcgaccctgaccgccgag
atcggtggcctgccggagctggacggggtgcgctggagctcgccggacaactggcacgtc
accctgggtttctacggcgaggaggaccccgcggagcgggccgggtggctgcgcccgcgg
ctggcgggaatgccggcgccgcggatctggttggaaggtgcgggcacgttcacccgggtc
ctctacctcggggtgtacggcgaggggatcaccgaactcggcctcgccgccggagccggt
gacgagggccgcccctacctgccgcacctgacgctggcgcgcacgcgcgagcgggtgccg
ccggagctggcgcggcggctgtccggctaccgcagccggatgtggacggccgcggaggcg
gtgctcatgcggtcgcagcggaccgccgggggtgtccggtatgcggtggtcgagcggttc
ccgctgtcccagcaggccaggtag
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