Amycolatopsis thermalba: L1857_15055
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Entry
L1857_15055 CDS
T08681
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
athm
Amycolatopsis thermalba
Pathway
athm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1857_15055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
athm03019
]
L1857_15055
03016 Transfer RNA biogenesis [BR:
athm03016
]
L1857_15055
Enzymes [BR:
athm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
L1857_15055
Messenger RNA biogenesis [BR:
athm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
L1857_15055
Transfer RNA biogenesis [BR:
athm03016
]
Prokaryotic type
tRNA degradation factors
L1857_15055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
Mug135_C
KH_NusA_1st
S1_RRP5
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
UQS24052
UniProt:
A0ABY4NVF7
LinkDB
All DBs
Position
3115491..3117743
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AA seq
750 aa
AA seq
DB search
MTEASGPVVHEAEAVIDNGRFGTRTIRFETGRLARQAAGAVVAYLDEETMLLSATTASKQ
PKEHFDFFPLTVDVEERMYAAGRIPGAFFRREGRPSTDAILTCRLIDRPLRPSFADGLRN
EIQIVVTVQSLHPEDPYDVLAINAASASTQIGGLPFSGPIGGVRVALIEGQWVAFPTWTQ
LEQATFNMVVAGRVVGDDVAIMMVEAEGTENTLDLIAGGAPAPTEQAVAEGLAAAKPFIR
VLCEAQQKLADAAAKPTGDFPVFPAYQPDAYDAVAAIATEDLAKALTIAGKQERENATDE
VKAAVLAKVGLGEGEAFEGRDKEIGAAFRSLTKKLIRQRILRDEVRIDGRGLTDIRQLAA
EVAIIPRAHGSALFERGETQILGVTTLNMLRMEQQIDSLSPETTKRYLHHYNFPPFSTGE
TGRVGSPKRREIGHGMLAERALVPVLPKRDEFPYAIRQVSEALGSNGSTSMGSVCASTMS
LLNAGVPLKAPVAGIAMGLVSDEVDGETRYVALTDILGAEDAFGDMDFKVAGTRDFITAL
QLDTKLDGIPSDVLAGALNQAKDARLTILEVLAEAIDTPDEMSPYAPRVTSVKIPVDKIG
EVIGPKGKMINSITEETGADISIEDDGTIYVGAADGPSAEAAISKINAIANPQLPKVGER
FLGTVVKTAAFGAFVSLLPGKDGLIHISKLGNGKRIAKVEDVVNVGDKLRVEIADIDNRG
KISLVLVKDEEEGEKKAEDAPAEGAEADAK
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagcaagcggacccgtcgtgcacgaggccgaggccgtcatcgacaacggcagg
ttcggaactcgcacgatccgcttcgagacgggcaggctcgcccggcaggccgccggcgcc
gtcgtggcctacctggacgaagagaccatgctgctgtcggcgaccaccgcctccaagcag
ccgaaggagcacttcgacttcttcccgctgacggtggacgtcgaggagcggatgtacgcc
gcgggccggatcccgggcgcgttcttccgccgcgagggccgtccctccaccgacgcgatc
ctgacctgccgcctgatcgaccggccgctgcgcccgtcgttcgccgacggcctgcgcaac
gagatccagatcgtcgtcacggtgcagagcctgcaccccgaggacccctacgacgtgctg
gcgatcaacgccgcgtcggcctcgacccagatcggcggcctgccgttctccggcccgatc
ggcggcgtgcgcgtcgccctgatcgagggccagtgggtggcgttcccgacctggacgcag
ctggagcaggcgaccttcaacatggtcgtcgccggccgtgtcgtgggtgacgacgtcgcg
atcatgatggtcgaggccgagggcaccgagaacacgctcgacctgatcgcggggggcgcc
ccggcgccgaccgagcaggccgtggccgagggcctggccgccgccaagccgttcatccgg
gtgctgtgcgaggcgcagcagaagctcgccgacgcggccgccaagccgaccggtgacttc
ccggtgttccccgcctaccagcccgacgcctacgacgcggtcgccgcgatcgcgacggag
gacctggccaaggcgctgaccatcgccggcaagcaggagcgcgagaacgccaccgacgag
gtcaaggccgcggtgctggccaaggtcggcctcggcgagggcgaggcgttcgagggccgt
gacaaggagatcggcgccgcgttccgctcgctgaccaagaagctgatccgtcagcgcatc
ctgcgcgacgaggtccgcatcgacggtcgcggcctgaccgacatccgccagctggcggcc
gaggtcgcgatcatcccgcgggcgcacggttcggcgctgttcgagcgcggcgagacccag
atcctgggtgtcaccacgctgaacatgctgcgcatggagcagcagatcgactcgctgtcg
ccggagacgacgaagcggtacctgcaccactacaacttcccgccgttctccaccggcgag
accggccgcgtgggctcgcccaagcggcgcgagatcggccacggcatgctggccgagcgc
gcgctggtgccggtgctgccgaagcgggacgagttcccctacgccatccggcaggtgtcg
gaggcgctgggctccaacgggtccacctcgatgggctcggtctgcgcgtccacgatgtcg
ctgctcaacgccggcgtgccgctcaaggcgccggtcgcgggcatcgcgatgggcctggtg
tccgacgaggtcgacggcgagacgcggtacgtcgcgctgaccgacatcctcggcgccgag
gacgccttcggtgacatggacttcaaggtcgccggcacccgggacttcatcaccgcgctg
cagctggacaccaagctcgacggcatcccctccgacgtcctggctggcgcgctgaaccag
gccaaggacgcccggctgaccatcctcgaggtgctggccgaggccatcgacaccccggac
gagatgagcccgtacgccccgcgcgtcacgagcgtgaagatcccggtcgacaagatcggc
gaggtcatcgggccgaagggcaagatgatcaactcgatcaccgaggagaccggcgccgac
atctcgatcgaggacgacggcacgatctacgtgggtgcggccgacggcccgtccgcggag
gccgcgatcagcaagatcaacgccatcgcgaacccgcagctgccgaaggtgggcgagcgc
ttcctgggcaccgtggtgaagacggccgcgttcggcgcgttcgtctcgctgctgccgggc
aaggacggcctgatccacatctcgaagctgggcaacggcaagcgcatcgccaaggtcgag
gacgtggtcaacgtgggcgacaagctccgcgtcgagatcgccgacatcgacaaccgcggc
aagatcagcctggttctcgtcaaggacgaggaagagggcgagaagaaggccgaggacgct
cccgccgagggcgccgaggccgacgccaagtag
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integrated database retrieval system
