Amycolatopsis thermalba: L1857_15230
Help
Entry
L1857_15230 CDS
T08681
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
athm
Amycolatopsis thermalba
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
athm03009
]
L1857_15230 (rimO)
Enzymes [BR:
athm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
L1857_15230 (rimO)
Ribosome biogenesis [BR:
athm03009
]
Prokaryotic type
ribosomal protein modification factors
L1857_15230 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
DUF3079
Motif
Other DBs
NCBI-ProteinID:
UQS27868
LinkDB
All DBs
Position
3150765..3152195
Genome browser
AA seq
476 aa
AA seq
DB search
MSVVSSAATESSGRRVSLLTLGCARNEVDSEELAGRLAEGGWELADEPEGSDVIVVNTCG
FVESAKKDSVDTLLAAADTGAKVVAVGCMAERYGAELAESLPEAHAVLGFDHYHDLAARL
DDVAAGRTIASHTPADRRKLLPITPVERAAATEDVSIPGHGWGPRVLRSRLSDSPVAALK
IASGCDRRCSFCAIPSFRGSFVSRHPDEILAEAAWLAGQGVKELFLVSENSTSYGKDLGR
ALGGTRALELLLPKLAGIEGIERVRVSYLQPAETRPDLVRAIATTPGVAPYFDMSFQHSS
ETVLRRMRRFGSTKSFLALIEQIREYAPEAGIRSNVIVGFPGETEDDVAELEHFLTEAGL
DAVGVFGYSDEDGTEAETYDGKIDPEVVAERVVRVSALVEELTAQRAEDRVGEIVDVLVE
EADAEEVSGRAAHQAPEVDGACVVLDGEGLAVGQMVRCRVVGSEGVDLLVEPDAGR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
ctgagtgtcgtgtcttctgccgccaccgagtcctccggccgtcgtgtctccctgctgacc
ctgggctgcgcccgcaacgaggtggactccgaggagctggccggccggctcgccgaaggg
ggctgggagctggccgacgaacccgagggcagcgacgtcatcgtcgtcaacacctgcggc
ttcgtggagtcggcgaagaaggactcggtggacacgctgctggccgccgcggacaccggc
gcgaaggtcgtcgcggtcggctgcatggccgagcgctacggcgccgagctggccgagagc
ctgccggaggctcatgcggtcctcggcttcgaccactaccacgacctcgccgcccgcctg
gacgacgtcgccgccgggcgcaccatcgcctcgcacactccggccgaccgccgcaagctg
ctcccgatcaccccggtcgagcgcgccgcggccaccgaggacgtgtcgatccccggccac
ggctgggggccccgcgtgctgcgcagccggctgtccgactcgccggtggcggcgctgaag
atcgcctcgggctgcgaccgccgctgctcgttctgcgcgatcccgtcgttccgcggctcg
ttcgtctcccgccacccggacgagatcctcgccgaggccgcgtggctggccggccagggc
gtcaaggagctgttcctggtcagcgagaactccacctcgtacggcaaggacctcggccgc
gccctgggcggcacccgcgccctggagctgctgctgccgaagctggccggcatcgagggc
atcgagcgggtgcgggtgtcctacctgcagccggccgagacgcgcccggacctggtccgc
gcgatcgcgaccaccccgggcgtggcgccctacttcgacatgtccttccagcactccagc
gagaccgtgctgcgccggatgcgccggttcggctccaccaagtcgttcctcgcgctgatc
gagcagatccgcgagtacgcgccggaggcgggcatccgcagcaacgtgatcgtcggcttc
cccggggagaccgaggacgacgtcgccgagctggagcacttcctcaccgaggccggcctg
gacgcggtcggcgtgttcggctactccgacgaggacggcaccgaggccgagacctacgac
ggcaagatcgatcccgaggtggtcgccgagcgcgtcgtgcgggtgtccgcgctggtcgag
gaactgaccgcgcagcgcgccgaggaccgcgtcggcgagatcgtcgacgtgctggtcgag
gaggccgacgccgaggaggtgtccggccgcgccgcgcaccaggctccggaggtcgacggc
gcgtgcgtcgtgctcgacggcgaggggctcgcggtcggccagatggtccgctgccgggtc
gtcggctccgagggcgtcgacctgctcgtcgagccggacgccggcagatga
DBGET
integrated database retrieval system
