Amycolatopsis thermalba: L1857_15405
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Entry
L1857_15405 CDS
T08681
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
athm
Amycolatopsis thermalba
Pathway
athm00470
D-Amino acid metabolism
athm00550
Peptidoglycan biosynthesis
athm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
L1857_15405 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
L1857_15405 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
athm01011
]
L1857_15405 (murD)
Enzymes [BR:
athm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
L1857_15405 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
athm01011
]
Precursor biosynthesis
Amino acid ligase
L1857_15405 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
AlaDh_PNT_C
TrkA_N
NAD_binding_7
ADH_zinc_N
AdoHcyase_NAD
Shikimate_DH
GP38
NAD_binding_2
Pyr_redox
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
UQS24113
UniProt:
A0ABY4NVM6
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All DBs
Position
3186470..3187867
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AA seq
465 aa
AA seq
DB search
MVFAGRNVLVAGAGVTGRSAVRALTERGARVTVTDGNAERLAELDGLGAELVPGLAEPPA
GTDLVVTSPGWRPTAPLLVASAAAGIEVIGDVELAWRASRDLPNPATWLAVTGTNGKTTT
VGMLESMLRAGGAHALACGNIGLPVLDAVFSGYEVLAVELSSFQLHWSSTLAPHASVVLN
LAEDHLDWHGSMESYAAAKGTIHAHSSVVVHNADDPWSVRLAGEYAPAGAKRVGFRLDTP
RPGELGLVEDLLIDRAYGPDPQHSADELISVSEVRPAGPHNLANALAAAALARAYGIDPA
GVAKGLREFQPGAHRAVEVGEFGGVRYVDDSKATNPHAAAGSLLAHSSVVWIAGGQLKGA
AVDELVEVVAGRLRGAVLMGADAPVIAAALARHAPDVPVHRVASGDDEAMNEAVSVASDL
ARPGDVVLLAPAGASLDMFRNYAHRGDAFADAVLARATGSADDGR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgccggacgcaacgtgctcgtcgccggcgccggggtcaccgggcgctcggcg
gtgcgggccctgaccgagcgcggcgcccgggtgacggtgaccgacggcaacgccgagcgg
ctggccgagctggacggcctgggcgccgagctggtgcccggcctggccgaacccccggcc
gggaccgacctggtggtcaccagccccggctggcggccgaccgcgccgctgctggtcgcc
tcggccgccgccgggatcgaggtgatcggcgacgtcgagctggcctggcgcgcctcccgg
gacctcccgaacccggccacctggctcgcggtcaccggcaccaacggcaagaccaccacg
gtcggcatgctggagtcgatgctgcgcgcgggcggggcgcacgcgctggcctgcggcaac
atcggcctgcccgtgctggacgcggtgttctccggctacgaggtgctggcggtggagctg
tccagcttccagctgcactggtcctcgacgctggcgccgcacgcctcggtggtgctcaac
ctcgccgaggaccacctggactggcacggctcgatggagtcctacgcggccgccaagggc
accatccacgcgcactcctcggtggtcgtgcacaacgccgacgacccgtggtcggtgcgg
ctggccggcgagtacgcgcccgccggggccaagcgggtcgggttccgcctggacaccccg
cgccccggtgagctgggcctggtcgaggacctgctgatcgaccgcgcctacggcccggac
ccgcagcactccgccgacgagctgatctcggtgagcgaggtgcgcccggccggcccgcac
aacctcgccaacgccctggccgcggccgcgctggcccgcgcgtacggcatcgaccccgct
ggggtcgccaagggcctgcgcgagttccagccgggcgcgcaccgcgcggtcgaggtgggc
gagttcggcggcgtccgctacgtcgacgactccaaggccaccaacccgcacgccgccgcc
gggtcgctgctcgcgcactccagcgtggtgtggatcgccggcgggcagctcaagggcgcc
gcggtcgacgagctggtcgaggtggtcgccggacgcctgcgcggcgcggtgctgatgggc
gccgacgccccggtgatcgccgccgctctcgcgcgacacgcgcccgatgtccccgtccat
cgggtcgcttcgggtgacgatgaggccatgaacgaggcggtctcggtggccagcgacctg
gcccggcccggtgacgtggtgctgctggcgcccgccggggcgtccctggacatgttccgc
aactacgcccatcggggcgacgccttcgccgacgcggtcctggcccgtgcgacggggtct
gccgatgacggtcgttga
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