Amycolatopsis thermalba: L1857_16300
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Entry
L1857_16300 CDS
T08681
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
athm
Amycolatopsis thermalba
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
athm03036
]
L1857_16300 (xerD)
Chromosome and associated proteins [BR:
athm03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
L1857_16300 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Integrase_1
Motif
Other DBs
NCBI-ProteinID:
UQS27883
LinkDB
All DBs
Position
3382642..3383514
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AA seq
290 aa
AA seq
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MERGTARNTLDSYARDLRRYLRYLEQAGIRDFRRITEAHVTGFGAALREGDEVHPPLAAS
SAARALVAVRGLHRFAHLDGLIEDDPAREVRPPAAAKRLPKALPVDDVLRLLAVPPAEGE
RPLRDRALLELLYSTGARISEAVGLDLDDVDREERTVLLDGKGGKQRLVPIGRPAVEALE
AYLVRARPVLARRGRGTAALFLNARGTRLSRQSAWQVLKTTAERAGISTAVSPHTLRHSF
ATHLLEGGADVRVVQELLGHASVTTTQVYTLVTMNTLREVYATAHPRALG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtggagcgcgggacggcacgcaacaccctggacagctacgcccgcgacctgcgccggtac
ctgcggtacctggagcaggccgggatccgggacttccggcggatcaccgaggcccacgtg
accgggttcggcgccgcgctgcgcgagggcgacgaggtgcacccgccgctggcggcgtcc
tcggcggcgcgggcgctggtggccgtgcgcgggctgcaccgcttcgcgcacctcgacggg
ctgatcgaggacgacccggcccgcgaggtgcggcccccggcggcggccaagcggctgccc
aaggcgctgccggtggacgacgtgctgcggctgctggccgtgccgcccgccgagggggag
cggccgctgcgcgaccgggccctgctggagctgctgtactccaccggggcccggatctcc
gaggcggtcgggctcgacctcgacgacgtcgaccgcgaggagcgcaccgtgctgctcgac
ggcaagggcggcaagcagcggctggtgccgatcggccgccccgcggtcgaggcgctggag
gcctacctggtgcgggcccgcccggtgctggcgcggcgcggccggggcaccgcggcgctg
ttcctcaacgcgcgcggcacgcggctgtcccggcagagcgcgtggcaggtgctcaagacc
accgccgagcgcgccgggatctccaccgccgtgtccccgcacacgctgcgtcacagtttc
gccacccacctgctggagggcggggcggacgtccgggtggtccaagagctgctcggccac
gcttcggtgacgacgacgcaggtgtacaccctggtcacgatgaacactctgcgtgaggta
tatgctacggcgcatcctcgggcgctgggttga
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