Amycolatopsis thermalba: L1857_16435
Help
Entry
L1857_16435 CDS
T08681
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
athm
Amycolatopsis thermalba
Pathway
athm00300
Lysine biosynthesis
athm00470
D-Amino acid metabolism
athm01100
Metabolic pathways
athm01110
Biosynthesis of secondary metabolites
athm01120
Microbial metabolism in diverse environments
athm01230
Biosynthesis of amino acids
Module
athm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
L1857_16435 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
L1857_16435 (lysA)
Enzymes [BR:
athm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
L1857_16435 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6725
Motif
Other DBs
NCBI-ProteinID:
UQS24300
UniProt:
A0ABY4NW78
LinkDB
All DBs
Position
complement(3413951..3415267)
Genome browser
AA seq
438 aa
AA seq
DB search
MTLAEVLPSVGLAGEPPLDEGLWPRTTRLAEGGDLTCGGVSLSRLAARFGTPVQVLDETE
IRHRAETLRAAFPGAEIAFATKALPVRGVLRLLGFSADVCSAGEIAMARSAGVPGDRILV
HGNVKTPEDLKAAFTARAGRIVADSGDEIDQLAALAPAGQRVLVRVTPGVDAHTHRALAT
AVDGQKFGFSLASGAALDAVGHVLAQPGLRAAGLHCHLGSQVRDTGAYAEAVRRMVHLLA
QVRDRHGVTLDQLDLGGGFAVPYRPGEAAFDLTGAARRILGTLRLECDRHRLGVLALVLE
PGRWLVATAGITLYRVAAVKDGFVAVDGGMSDNPRPALYGARYTARLVGRHTRAPRRPVT
IAGRHCEAGDILAEDVPLPADVRPGDLLAVPVSGAYHHALASNYNLTGRPPLVAVAAGAA
RVLVRRETEEDLLRRDVG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgacactcgccgaggtgctgcccagcgtgggcctcgccggtgaaccgccgctggacgag
ggcctgtggccgcgcaccacccgcctcgccgagggcggtgacctgacctgcggcggggtg
agcctgtcccggctcgccgcgcggttcggcacgccggtgcaggtgctcgacgaaaccgag
atccggcaccgcgccgagacgctgcgcgccgcgttcccgggcgccgagatcgccttcgcc
accaaggcactgcccgtgcgcggggtgctccggctgctgggcttcagcgcggacgtctgc
tcggccggggagatcgcgatggcgcgctcggcgggcgtgccgggcgaccggatcctggtg
cacggcaacgtgaagaccccggaggacctcaaggccgcgttcaccgcgcgcgccggccgg
atcgtggccgactccggcgacgagatcgaccagctcgccgcgctcgcccccgccgggcag
cgggtcctcgtgcgggtcaccccgggcgtcgacgcgcacacccaccgcgcgctggccacc
gccgtcgacggccagaagttcgggttctccctcgcctcgggcgccgcgctggacgccgtg
gggcacgtcctcgcccagccgggcctgcgggccgccgggctgcactgccacctcgggtcg
caggtccgcgacaccggcgcctacgccgaagccgtacggcgcatggtgcacctgctcgcc
caggtccgcgaccggcacggggtgacgctcgaccagctcgacctcggcggcgggttcgcc
gtgccctaccggccgggcgaggcggccttcgacctgaccggcgccgcccgccgcatcctg
ggcacgctgcgcctggagtgcgaccgccaccggctcggagtcctggccctggtgctggaa
cccggccgctggctcgtcgcgacggccggaatcacgctgtaccgggtggccgcggtgaag
gacggcttcgtcgcggtggacggcggcatgagcgacaacccgcgccccgcgctgtacggc
gcgcgctacaccgcccggctcgtcggacggcacaccagggcgccccgccgcccggtgacc
atcgccggccggcactgcgaggccggggacatcctggccgaggacgtcccgctgcccgcc
gacgtccgccccggcgacctgctggcggtgccggtgagcggcgcctaccaccacgcgctg
gcgtcgaactacaacctgaccggccgcccaccactggtcgccgtcgccgccggcgcggcg
cgggtgctggtgcgccgggagaccgaggaggacctgctgcgccgcgacgtgggctga
DBGET
integrated database retrieval system