Amycolatopsis thermalba: L1857_19235
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Entry
L1857_19235 CDS
T08681
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
athm
Amycolatopsis thermalba
Pathway
athm03420
Nucleotide excision repair
athm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L1857_19235
03430 Mismatch repair
L1857_19235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
athm03400
]
L1857_19235
Enzymes [BR:
athm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1857_19235
DNA repair and recombination proteins [BR:
athm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L1857_19235
MMR (mismatch excision repair)
Other MMR factors
L1857_19235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
DEAD
SLFN-g3_helicase
NACHT
RsbRD_N
nSTAND3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UQS24799
LinkDB
All DBs
Position
3995954..3998122
Genome browser
AA seq
722 aa
AA seq
DB search
MTVGFVWATDPETALTDVQSRDEEQERRYLAEAVRLLTTELERLNASIDKSVSTVDEHKR
YMWDNLRDMDFAEKANFRESVNLSVTLGEHAMRTRKRIERLLESPYFARVDFRRHAERDA
GAHYIGVHSLSDPESQEIVIHDWRAPVAGLYYDFEAGEAHFEAPEGTVRGAITGKRQYKI
SGGHLEYMFDSSLSIGDDVLQRELSRSADDKMRNIVATIQREQNAVIRNETAQVLILQGV
AGSGKTSIALHRVAFLLYRFKDTLSSDNVMILSPNKVFGDYIANVLPELGEEQIAEIDFD
KIAGRFLAKVTGYETFSEQVVDLLDRVDEAAAERMRYKAMPEFVTRLDEWISSRTREGFT
PAEIEQKRHRLSVDWVADTFAELRDLPIFTRLDGVAGRAVHLLKQQVTDRGAKWTAADTG
SVRKQVRAMFADKDAFALYKAFYAAHPDRRRLFKPLGRKKIEYADVFPLVYTMIKTARQE
SYRHIRHLLVDEMQDYAPIQYAVVRELFSCKMTILGDRNQSVNPFSSSSLSTIRSIFPEA
DCLELCKSYRSTTEITDFAQRISRNDKLVPIERHGRPPQVIACANQQDQEAQILALVRQH
SHSDHRSLGIICKTVAQAKTLHHALSQAGAELALLDYDSTAFAGGIVITSAHIAKGLEFD
TVIVPQVDEENYANEMDKSMLYIACTRAMHELHLTHTGPVSRFLEFAKPDGGLSAIPRQP
RG
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
gtgacagtaggttttgtgtgggcgaccgacccggagacggcattgacggacgtgcagtca
cgcgacgaggagcaggagcgccggtatctggccgaggcggtgcgtctgctgaccacggag
ctggagcggctgaacgcgtcgatcgacaagtcggtcagcaccgtggacgagcacaagcgg
tacatgtgggacaacctgcgtgacatggacttcgccgagaaggcgaactttcgcgagtcg
gtgaacctgtccgtcaccctcggcgaacacgcgatgcggacgaggaaacgcatcgagcgt
ctgctggagtctccctacttcgcgcgcgtcgacttccgccgtcacgccgaacgggacgcc
ggcgcccactacatcggcgtgcacagcctctcggatcccgagtcccaggagatcgtgatt
cacgactggcgggcacccgtggccggcctctactacgacttcgaggcgggggaggcgcac
ttcgaggcgcccgagggcactgtgcgcggcgcgatcaccggcaagcgccagtacaagatc
tccggcgggcacctggagtacatgttcgacagctcgctgagcatcggcgacgacgtcctg
cagcgggagctgagccggtccgccgacgacaagatgcgcaacatcgtcgcgaccatccag
cgggaacagaacgcggtgatccgcaacgagaccgcgcaggtgctgatcctgcaaggggtg
gcgggctccggaaagacgtcgatcgccctgcaccgggtggcgttcctgctctaccgcttc
aaggacaccctctcctcggacaacgtgatgatcctctctcccaacaaggtgttcggtgac
tacatcgccaacgtgcttcccgagctgggtgaggagcagatcgccgagatcgacttcgac
aagatcgccggcaggtttctcgcgaaggtcaccggctacgagaccttcagcgaacaggtc
gtcgacctcctcgaccgggtcgacgaggcggcggcggagcgcatgcgctacaaggcgatg
cccgagttcgtcacccgcctcgacgagtggatctcttcccggacccgggaggggttcacc
ccggcggagatcgaacagaagcgccaccgcctctccgtcgactgggtcgcggacaccttc
gccgaactacgcgaccttccgatcttcacacggctcgacggcgtggccggccgcgccgtg
cacctgctcaaacagcaggtgacagaccgcggtgccaagtggaccgctgccgacaccggc
agcgtccgcaagcaggtccgcgccatgttcgccgacaaggacgccttcgcgctctacaag
gcgttctacgcggcccacccggaccgtcggcgattgttcaagccactcggccggaagaag
atcgagtacgccgacgtgttcccgctggtctacacgatgatcaagacggcccggcaggag
agctaccgccacatccgtcacctgctggtcgacgagatgcaggactacgcgcccatccag
tacgccgtggtgcgcgagctgttctcctgcaagatgacgatcctgggtgataggaaccag
tcggtgaacccgttcagctcctcgtcgctgtcgacgatccgcagcatcttccccgaggcc
gactgcctggagctgtgcaagagctaccgctccacgaccgagatcaccgacttcgcccag
cgcatctcccgcaacgacaagctcgtcccgatcgagcggcacggacgaccaccccaggtc
atcgcctgcgcgaaccagcaggaccaggaggcgcagatcctggccctggtcaggcagcac
agtcacagcgaccaccgctccctcggcatcatctgcaaaaccgtcgcccaggcgaagaca
ctccaccacgccctgtcgcaagccggtgccgaactggccctgctcgactacgacagcaca
gcgttcgccggtggcatcgtcatcacctcggcacacatcgccaagggactggagttcgac
acggtgatcgtcccgcaggtggacgaggagaactacgccaacgagatggacaagagcatg
ctctacatcgcctgcaccagggccatgcacgagctccacctcacccacaccggacctgtc
tcgcgcttcctggagttcgcgaagcccgacgggggcctctccgcgatcccccggcagccg
cggggatga
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