Amycolatopsis thermalba: L1857_20480
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Entry
L1857_20480 CDS
T08681
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
athm
Amycolatopsis thermalba
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
athm03051
]
L1857_20480 (pafA)
Enzymes [BR:
athm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
L1857_20480 (pafA)
Proteasome [BR:
athm03051
]
Prokaryotic proteasome
Bacterial regulatory particles
L1857_20480 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
UQS25020
UniProt:
A0ABY4NY68
LinkDB
All DBs
Position
complement(4237423..4238781)
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AA seq
452 aa
AA seq
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MQRRIFGIETEFGVTCTFHGQRRLSPDEVARYLFRRVVSWGRSSNVFLSNGSRLYLDVGS
HPEYATAECDDLVQLVTHDKAGERILEDLLVDAERRLADEGIGGDIFLFKNNTDSAGNSY
GCHENYLVTRAGEFSRIADVLLPFLVTRQLICGAGKVLQTPRGAVYCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMAEPTTLLKIGTANLVLEMIEQGVQF
RDFTLDNPIRAIREISHDLTGRRPVRLAGGREASALDIQREYYGRAVQHVQANDSGPTAQ
RVVELWGRALDAVEQQDFGKIDTEIDWAIKHRLVERYRAKHNLDLSSPRVAQLDLAYHDI
RRGRGLFDLLQRKGLVRRITDDGEIELAKDTPPQTTRAKLRGDFIAAAQAAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRAVDERVDRLISSL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcggatttttggcatcgagaccgagttcggcgtcacctgcacgttccacggg
cagcgccggctctcgcccgatgaggtggcgcgctacctgttccggcgggtcgtgtcgtgg
gggcgctcgtccaacgtcttcctgtccaacggctcccggctctacctggacgtgggctcg
caccccgagtacgccacggccgagtgcgacgacctggtgcagctcgtcacgcacgacaag
gccggcgagcggatcctcgaggacctgctggtcgacgccgagcggcggctggccgacgag
ggcatcggcggggacatcttcctgttcaagaacaacaccgactcggcgggcaactcctac
ggctgtcacgagaactacctggtgacgcgcgcgggcgagttttcccggatcgccgacgtg
ctgctgccgttcctggtgacccgtcagctgatctgcggcgccggcaaggtgctgcagacg
ccgcggggcgcggtgtactgcctgtcgcagcgggccgagcacatctgggagggcgtctcc
agcgccacgacccggtcgcggccgatcatcaacacccgcgacgagccgcacgccgacgcc
gagcggtaccggcggctgcacgtcatcgtgggcgactcgaacatggccgagccgacgacg
ctgctgaagatcggcacggcgaacctggtgctggagatgatcgagcagggtgtgcagttc
cgggacttcacgctggacaacccgatccgggcgatccgcgagatcagccacgacctgacc
gggcggcgcccggtgcggctggccggcgggcgggaggcctcggcgctggacatccagcgc
gagtactacgggcgcgcggtgcagcacgtgcaggccaacgactcgggcccgaccgcgcag
cgggtggtggagctgtggggccgcgcgctggacgcggtggagcagcaggacttcggcaag
atcgacaccgagatcgactgggcgatcaagcaccggctggtggagcggtaccgggccaag
cacaacctggacctgtccagcccgcgggtggcgcagctggacctggcctaccacgacatc
cggcgcgggcggggcttgttcgacctgctgcagcgcaagggcctggtgcggcggatcacc
gacgacggggagatcgagctggccaaggacacgccgccgcagaccacgcgggcgaagctg
cggggcgatttcatcgccgccgcgcaggccgccgggcgggacttcacggtcgactgggtg
cacctcaagctcaacgaccaggcgcagcggaccgtgttgtgcaaggacccgttccgcgcg
gtggacgagcgcgtcgaccggctgatcagctcgctgtga
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