Amycolatopsis thermalba: L1857_25480
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Entry
L1857_25480 CDS
T08681
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K14698
ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
Organism
athm
Amycolatopsis thermalba
Pathway
athm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
L1857_25480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
athm02000
]
L1857_25480
Transporters [BR:
athm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
L1857_25480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_22
ABC_ATPase
AAA_29
AAA_21
AAA_30
nSTAND1
RsgA_GTPase
AAA_25
AAA_33
AAA_24
Talin_middle
AAA_15
AAA_18
Motif
Other DBs
NCBI-ProteinID:
UQS25921
LinkDB
All DBs
Position
5237071..5238819
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AA seq
582 aa
AA seq
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MTTAPVEAAPAGLGRLLRPHLPAFAAVVVLQVAGALAGLAPLLAVAELGRALLAPGPADS
GRVWTVVLAGAGGLLVRLLCTAASSGIAHVLDGRVQLSFRRHLAARLGRAPIAWFARRRT
GELAKVVGDDVSAVHPFLAHTPGELVSAFVVPLVSLVYLVSIDWRLTLITLIPVVLAVAM
VPLMTTTTRQREQREFDAAMGRIASSVVEFVRGIAVVKAFGGSERAHRTFRTATDDFVAT
FLRWVRGMSGIAAAMQLALSPPFVLVVVLVGGAALITSGSLAPADLLPFLLLGLGLTAPV
AALGHGFDDLQAAGRAVGRIREVLAVPPLPEPTHPVAPRGHRVELRDVRFSHVEGHEVLH
GIDLVLEPGTVTALVGPSGSGKSTVVRLLPRFADPDSGSVTLGGVDLREIGSDRLHRMVS
FVFQETSLLRASVADNIALAVPRADRADVVRAARLANIHDRILELPRGYDTVLGEEAGLS
GGEAQRIAIARALLAGAPVLVLDEATAFADPRTEHAVRRALATLKGDRTILVIAHRLETI
AGADTVVMLENGSITEHGKPAELLAHNGKFAAFWRARGEEPR
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgccccggtggaggccgcaccggccggtctcgggcggctgctgcggccgcac
ctccccgccttcgccgccgtggtggtgctgcaggtcgccggcgcgctggcgggcctcgcg
ccgctgctggcggtcgccgaactcggccgtgccctgctcgcgccggggcccgccgacagc
ggtcgcgtgtggacggtcgtcctcgcgggcgcgggcggcctgctcgtccggctgctgtgc
accgccgcctcctcggggatcgcgcacgtgctggatggccgggtgcagctgtccttccgc
cgtcacctcgccgcgcggctcggccgggcgccgatcgcctggttcgcccgccgccgcacc
ggtgagctggccaaggtggtcggcgacgacgtcagcgccgtgcacccgttcctcgcccac
accccgggcgagctcgtctccgcgttcgtcgtgccgctggtgtcgctggtctacctggtc
tcgatcgactggcggctcacgctgatcaccctgatcccggtggtgctggcggtggcgatg
gtcccgctcatgacgaccaccacccggcagcgtgaacagcgggagttcgacgccgccatg
ggccgcatcgcgagttccgtcgtcgagttcgtgcgcggcatcgcggtggtcaaggcgttc
ggcgggtccgagcgcgcccaccgcacgttccgcaccgccaccgacgacttcgtcgccacc
ttcctccgctgggtgcgtggcatgtcggggatcgccgcggcgatgcagctcgccctgtcg
ccgccgttcgtgctggtggtcgtgctcgtcggcggcgcggccctgatcacctcgggcagc
ctggccccggccgacctgctgcccttcctgctgctcgggctgggcctgaccgccccggtc
gccgcgctgggccacgggttcgacgacctgcaggccgccgggcgcgcggtcggccggatc
cgggaggtcctcgcggtgccgccgctgccggaacccacacaccccgtcgcaccgcgggga
caccgggtggaactgcgtgacgtccggttctcccacgtcgagggccacgaggtgctgcac
ggcatcgatctggtgctcgaaccgggcacggtcaccgcgctggtcggcccgtcgggcagc
ggcaagtccactgtggtccggttgctgccgcggttcgccgacccggactccggctcggtc
acgctcggcggcgtggacctgcgcgagatcggcagcgaccggctccaccggatggtgtcg
ttcgtcttccaggagacgtccctgctgcgggcctccgtcgcggacaacatcgcgctcgcg
gtgccgcgggccgatcgtgcggatgtcgtccgcgccgcgcggctggcgaacatccacgac
cggatcctggaactcccgcgcggctacgacacggttctcggcgaggaagccgggctgtcc
ggcggcgaagcacagcgcatcgcgatcgcccgtgcgctgctcgccggcgcgcccgtcctg
gtgctcgacgaggccaccgccttcgccgatccgcggaccgaacacgcggtgcgccgcgcg
ctggcgacgctgaagggcgaccgcacgatcctggtgatcgcccaccggctggagacgatc
gccggcgccgacaccgtggtgatgctggagaacgggtcgatcaccgagcacggcaagccc
gccgaactgctggcgcacaacgggaagttcgccgcgttctggcgggcccggggagaggaa
ccacgatga
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