Amycolatopsis thermalba: L1857_26575
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Entry
L1857_26575 CDS
T08681
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
athm
Amycolatopsis thermalba
Pathway
athm00020
Citrate cycle (TCA cycle)
athm00190
Oxidative phosphorylation
athm00650
Butanoate metabolism
athm00720
Other carbon fixation pathways
athm01100
Metabolic pathways
athm01110
Biosynthesis of secondary metabolites
athm01120
Microbial metabolism in diverse environments
athm01200
Carbon metabolism
Module
athm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
athm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
athm_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
L1857_26575
00650 Butanoate metabolism
L1857_26575
09102 Energy metabolism
00190 Oxidative phosphorylation
L1857_26575
00720 Other carbon fixation pathways
L1857_26575
Enzymes [BR:
athm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
L1857_26575
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
GIDA
NAD_binding_8
HI0933_like
AlaDh_PNT_C
FAD_binding_3
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
UQS26122
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Position
5476545..5478473
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AA seq
642 aa
AA seq
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MSTVFVEGTPISDTRAPDVPLAQRWERRRFTARLVNPANRRRLSVIVVGTGLAGASAAAT
LAELGYRVRSFCYQDSPRRAHSIAAQGGINAAKNYRGDGDSIHRLFYDTVKGGDFRARES
NVHRLAELSVRIIDQAVAQGVPFAREYGGLLDTRSFGGAQVSRTFYARGQTGQQLLLGAY
QAMARQIHLGRIAMHPRTEMLDLVVVDGRARGVVVRDLVTGEISTHVADAVVLATGGYGN
AFHLSTNAKGCNATAIWRAHRRGALFANPCFTQIHPTCIPVSGGHQSKLTLMSESLRNDG
RVWVPVTPGDARPPSEIPEAERDYFLERRYPAFGNLVPRDIASRAVKSVCDAGRGVGPGG
RGVYLDFADALSRLGRDGVESRYGNLFAMYERITGDDPYRVPMRIYPAVHYTMGGLWVDY
DLRSTIPGLFVIGEANFSDHGANRLGASALMQGLADGYFILPTTIGDYLADGPFPAVGDV
SGPQAEVEDRIARLLAVDGDRSAEDFHRELGAVLWEHCGMSRTEAGLRKALELIPALREE
FWARLRVPGSGASLNQSLEKAGRVADFLELAELMCVDALHRTESCGGHFREESRTVDGEA
QRDDAAFSYVAAWEFTGPGKPPVLHREALTFDHVTPSQRSYS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgtgttcgtcgaaggaaccccgatctccgacacccgcgcgccggacgtcccg
ctcgcgcagcgctgggagcggcggcggttcaccgcccgcctggtcaaccccgccaaccgg
cggcggctctcggtcatcgtggtcggcaccgggctggccggcgcgtcggccgccgcgacc
ctggccgaactgggctaccgggttcgctcgttctgctaccaggacagcccgcgccgcgcg
cacagcatcgccgcgcagggcgggatcaacgcggccaagaactaccgcggcgacggcgac
agcatccaccggctgttctacgacacggtgaagggcggcgacttccgggcccgggagtcc
aatgtgcaccgcctcgccgaactgagcgtgcggatcatcgaccaggccgtggcgcagggc
gtgccgttcgcgcgcgagtacggcggcttgctggacacgcggtcgttcggcggcgcgcag
gtgtcccggacgttctacgcccgcgggcagaccgggcagcagctgctgctcggcgcgtac
caggcgatggcgcggcagatccacctcgggcgaatcgcgatgcacccgcgcaccgagatg
ctcgacctggtcgtggtggacggccgggcgcgcggggtcgtggtgcgggacctggtcacc
ggcgagatctccacgcacgtcgcggacgcggtggtgctggccaccggcggttacggcaac
gctttccacctgtccaccaacgccaagggctgcaacgcgaccgcgatctggcgcgcgcac
cggcggggcgcgttgttcgccaacccgtgcttcacgcagatccacccgacgtgcatcccg
gtcagcggcgggcaccagtcgaagctcacgctgatgagcgagtcgctgcgcaacgacggg
cgggtgtgggtgcccgtcacccccggcgacgcgcggccgccgtcggagatccccgaggcc
gagcgggactacttcctggagcgacggtatccggcgttcgggaacctcgtgccgcgcgac
atcgcctcccgcgcggtgaagagcgtgtgcgacgcgggccgtggcgtcggacccggcggg
cgcggggtgtacctggacttcgcggacgcgctttcccggctcgggcgggacggcgtggaa
tcccgctacggcaacctgttcgcgatgtacgagcggatcaccggggacgatccgtaccgg
gtgccgatgcgcatctacccggcggtgcactacacgatgggcgggctgtgggtcgactac
gacctgcgcagcacgatccccgggctgttcgtgatcggcgaggcgaacttctccgaccac
ggcgccaaccggctcggggcgagcgccctgatgcagggcctcgcggacgggtacttcatc
ctgcccacgacgatcggcgactacctggccgacgggccgttccctgccgtgggggacgtg
tccgggccgcaggcggaggtcgaggaccggatcgcgcggctgctggctgtggacggggac
cggtccgccgaggacttccaccgcgagctgggtgcggtgctgtgggagcactgcgggatg
agccgcaccgaggcggggctgcggaaggcgctggagctgatcccggcgctgcgggaggag
ttctgggcgcggctgcgggtgccgggttcgggcgcttcgctgaaccagtcgctggagaag
gccgggcgggtcgcggacttcctggagctggcggagctgatgtgcgtggacgcgttgcac
cgcaccgagtcctgcggcgggcacttccgggaggagagccggaccgtcgacggtgaggcc
cagcgcgacgacgccgcgttttcgtacgtggccgcgtgggagttcaccgggcccgggaag
ccgccggtgctgcaccgcgaagccctgacgttcgaccatgtcacccccagtcagcggagc
tactcgtga
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