Amycolatopsis thermalba: L1857_27050
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Entry
L1857_27050 CDS
T08681
Name
(GenBank) DEAD/DEAH box helicase
Organism
athm
Amycolatopsis thermalba
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
L-fibroin
Motif
Other DBs
NCBI-ProteinID:
UQS26210
UniProt:
A0ABY4P1H0
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Position
complement(5573497..5576163)
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AA seq
888 aa
AA seq
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MVITVEWTETTRAIFVPSDPPRDGVLAVWGDEPGPVPVELVLPAGAGKSFRRTRVDAHVL
PLAGAIPRLLAVSDGSPSVRAWSAAVAAGLNLVARGRLRRPSGVDSWRAGPLDTADEDLL
RDLAAALPPEAHALPLSGLKRIRLHSPETLVRALWDATADVLGRTPAARVVTDGPAFGAQ
IQLRVEVRETGDDFAFTGVLAVRSRADPSLVVDAAALWDAPEAVLSRFGEQVEAQLLIGL
RRGARAWAPLGRVLDAAPPSELTLDDTEVVELLDGGRDALAAAGVEVLWPRGVFGEPLRA
KASVTPSPGSEGGAVFRLTDLLRFRWQLSLGGGTLSEAEVTALAEAKRPLVRLRGQWVRA
DSHLLARLRRARPAVTGAQALAAALTGELRLDDEELDFAAPPALDRLVHRLRAPAGPVEP
DPELQATLRPYQRTGLSWLVRMTELGLGGVLADDMGLGKTIQLIALHLHRRPSGPTLVLC
PTSLLGNWEREFARFAPKVPVRRFHGGRRHLDDLAPDEVVLATYGVLRRDRATLSEVDWG
LVAADEAQHVKNPLSVTAKELRRIPAAARVALTGTPMENRLTELWSILDWTTPGLLGTLE
HFRRTIARPVERDRDARGAERLAATVRPFLLRRRKTDPDIAPELPRKTETDRYVPLTTEQ
ATLYEAVVRENLAVIRESRGVQRRGQVLKLLTELKQICNHPAQYLADSGPVAGRSGKLAA
FEELLDVILDEGESVLVFSQYVRLCRLLEARLTERGLPVQLLSGADSVRQREEMVARFQR
GDVPVFLLSLKAGGVGLNLTRATHVIHYDRWWNPAVEDQATDRAYRIGQDRPVQVHRLIA
EGTLEERIAGVLAEKRGLAERVIGAGEDWITELSDEELTELVRLGKPG
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcaccgtggaatggaccgagacgaccagggcgatcttcgtgccctcggacccg
ccccgggacggtgtgctcgccgtctggggtgacgagccggggccggtaccggtcgaactc
gtgctgcccgccggcgccggcaagtccttccgccgcaccagggtcgacgcgcacgtcctc
ccgctcgccggcgccatcccgcgcctgctcgccgtcagcgacggaagcccttcggtgcgg
gcgtggtcggcggcggtcgccgcgggcctgaacctcgtcgcccgcggccggctccggcgt
ccgtccggtgtggacagctggcgcgccgggccgctcgacaccgccgacgaggacctgctg
cgtgacctggccgccgccctgccgcccgaggcgcacgccctcccgctgtccggcctcaag
cgcatccgcctgcactcgcccgaaacgctcgtccgcgcgctctgggacgccaccgccgac
gtgctcggccgcacccccgcggcccgcgtggtcaccgacgggcccgcgttcggcgcgcag
atccagctccgcgtcgaggtgcgtgagaccggcgacgacttcgcgttcaccggcgtcctc
gccgtgcgcagccgcgccgaccccagcctggtcgtggacgcggccgcgctgtgggacgcg
ccggaggccgtgttgtcccgcttcggtgagcaggtagaggcgcagctgctcatcgggctg
cggcgcggcgcccgcgcgtgggctccgctgggccgcgtgctcgacgccgccccgcccagc
gagctgaccctggacgacaccgaggtcgtcgagctgctcgacggtggccgcgacgccctg
gcggccgccggtgtcgaggtgctgtggccgcgcggcgtgttcggcgaaccgctgcgggcc
aaggcgagcgtgacgccgtcgccgggcagcgagggcggggccgtgttccggctgaccgac
ctgctgcggttccgctggcagctcagcctgggcggcggaaccctcagcgaggccgaggtc
accgcgctcgccgaggccaagcgcccgctggtgcgcctgcgcgggcagtgggtgcgcgcc
gactcccacctgctggcacgcctgcgtcgcgcgcgcccggctgtcaccggcgcgcaggcg
ctggccgcggccctgaccggcgagctgcggctcgacgacgaggagctggacttcgccgcc
ccgcccgcgctcgaccgtctcgtgcaccggttgcgtgccccggccgggccggtcgagccg
gatccggagttgcaggccacgctgcggccgtaccagcggaccgggctgtcgtggctggtc
cggatgaccgagctgggcctcggcggtgttctcgccgacgacatgggcctgggcaagacg
atccagctcatcgccctgcacctgcaccgccgcccgtcggggccgacgctggtgctgtgc
ccgacgtcgctgctgggcaactgggagcgtgagttcgcccggttcgcgccgaaggtcccg
gtgcggcggttccacggcgggcggcggcacctggacgacctggcgcccgacgaggtcgtc
ctcgccacctacggtgtgctgcgccgcgaccgggcgacgctgtccgaagtggactggggg
ctggtcgcggccgacgaggcgcagcacgtcaagaacccgctttcggtgacggcgaaggaa
ctccgcaggatcccggccgcggcgcgcgtcgcgttgaccggcacgccgatggagaaccgg
ctcaccgaactgtggtccattctggactggacgacgccggggctgctcggcacgctggag
cacttccgccgcacgatcgcgcgcccggtcgagcgcgaccgcgacgcccgcggtgccgaa
cgcctggccgcgacggtgcggccgttcctgttgcggcgccgcaagaccgacccggacatc
gcgccggagctgccgcgcaagaccgagaccgaccggtacgtgccgctgaccaccgagcag
gccaccctgtacgaggcggtggtgcgggagaacctggcggtgatccgcgagtcgcggggc
gtgcagcggcgcgggcaggtgctcaagctgctgaccgagctgaagcagatctgcaaccac
ccggcgcagtacctcgcggacagcgggccggtcgccgggcggtcgggcaagctcgccgcg
ttcgaggagctgctggacgtgatcctcgacgagggcgagagcgtgctggtgttcagccag
tacgtgcggctgtgccggctgctggaggcgcggctgaccgaacgggggctgccggtgcag
ctgctctccggtgccgactcggtgcggcagcgggaggagatggtggcgcggttccagcgc
ggtgacgtgccggtgttcctgctgtcgctcaaggcgggcggggtcgggctgaacctgacc
cgcgcgacgcacgtcatccactacgaccggtggtggaacccggcggtggaggaccaggcg
accgaccgggcgtaccggatcgggcaggaccggccggtgcaggtccaccggctcatcgcg
gagggcacgctggaggagcggatcgccggggtgctcgcggagaagcgcggcctggccgaa
cgcgtgatcggcgcgggggaggactggatcacggagctgagcgacgaggagctgacggag
ctcgtccgcctggggaagccgggatga
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