Amycolatopsis thermalba: L1857_27275
Help
Entry
L1857_27275 CDS
T08681
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
athm
Amycolatopsis thermalba
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
athm03032
]
L1857_27275
03400 DNA repair and recombination proteins [BR:
athm03400
]
L1857_27275
Enzymes [BR:
athm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
L1857_27275
DNA replication proteins [BR:
athm03032
]
Prokaryotic type
DNA Topoisomerases
L1857_27275
DNA repair and recombination proteins [BR:
athm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L1857_27275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UQS26253
LinkDB
All DBs
Position
5623541..5624557
Genome browser
AA seq
338 aa
AA seq
DB search
MAMRLRKSKLSEPGIRRRRSGRGFRYFTPEGEPLRDEETLQRIKSLAVPPAWRDVWICPY
PNGHIQAVGTDDAGRRQYRYHDRWRQERDEEKHERVVELAKRLPQWRRRVAEDLVKPGLG
CERVLAAALRMIDRGVFRVGSEEYAENNGTYGAATLLREHVTVKRDELTFCYPAKGGIER
NITLSDAELAAAVKALRRARTGSDRLFVYRTPNGWHEVHADEINERFKEMVGDDFTVKDL
RTWNATVLAATAFAAAEEVKSQRGLKRTQAAVMREVSEELGNTPAVCRKSYVDPRIVEAH
ARGRTIASAVHRLGHTGIRGDEDREVLERAVVRLLDNV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggccatgcggctgcgcaagagcaagctctccgagcccggcatccggcggcggcgcagt
ggccgaggctttcgctatttcacccccgagggggagccgctgcgcgacgaggagaccctg
cagcggatcaagagcctcgcggtgccgccggcgtggcgcgacgtgtggatctgcccgtat
ccgaacggtcacatccaggcggtgggcaccgacgacgccggccgccgccagtaccgctac
cacgaccgctggcgccaggagcgggacgaggagaagcacgagcgcgtcgtcgagctggcg
aagcggctgccgcagtggcgccggcgggtcgccgaggacctggtcaagccgggtctgggc
tgcgagcgcgtgctggcggcggcgctgcggatgatcgaccggggcgtcttccgggtcggc
agcgaggagtacgccgagaacaacggcacctacggggccgcgaccctgctgcgcgagcac
gtcaccgtcaagcgggacgagctgaccttctgctaccccgccaagggcgggatcgaacgc
aacatcacgctgagcgacgccgaactggccgcggcggtgaaggcgttgcgccgcgcgcgg
acgggaagcgaccggttgttcgtgtaccgcacacccaacggctggcacgaggtgcacgcc
gacgagatcaacgagcgcttcaaggagatggtcggggacgacttcaccgtgaaggacctg
cggacgtggaacgcgaccgtgctcgccgccaccgcgttcgcggcagccgaagaggtgaag
tcccagcgcgggctgaaacgcacgcaggccgccgtgatgcgcgaggtgtccgaggagctg
ggcaacacccccgcggtgtgccggaagtcctatgtggacccgcggatcgtggaggcgcac
gcgcgcggcaggaccatcgcctcggcggtgcaccggctcggccacaccggcatccgcggc
gacgaggaccgggaggtgctggagcgcgcggtcgtccgcctgctggacaacgtttga
DBGET
integrated database retrieval system
