Amycolatopsis thermalba: L1857_29825
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Entry
L1857_29825 CDS
T08681
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
athm
Amycolatopsis thermalba
Pathway
athm00260
Glycine, serine and threonine metabolism
athm00630
Glyoxylate and dicarboxylate metabolism
athm00670
One carbon pool by folate
athm00785
Lipoic acid metabolism
athm01100
Metabolic pathways
athm01110
Biosynthesis of secondary metabolites
athm01200
Carbon metabolism
Module
athm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
L1857_29825 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
L1857_29825 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
L1857_29825 (gcvP)
00670 One carbon pool by folate
L1857_29825 (gcvP)
Enzymes [BR:
athm01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
L1857_29825 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
UQS26706
LinkDB
All DBs
Position
complement(6153676..6156498)
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AA seq
940 aa
AA seq
DB search
MSFADRHIGPSEHEQAKMLAECGFGSLDALVEAAVPASIRTAGGLDLPPASEQEATAQLR
ALAAKNRPMTQMIGLGFSDTVTPPVIRRNVLENPAWYTAYTPYQPEISQGRLEALLNFQT
MVSNLTGLDIANASLLDESTAVAEAVLLMRRASKAKSSRVVLDAECLPQTIAVVRTRAEA
VGIEVDVRDLGTGLPEDFFGVVVQYPGASGVLRGRGFYEAIGKVAKDAGALYTVAADLLA
LTLVTAPGEFGADIAAGTTQRFGVPLGYGGPHAGYLSVRKGLERSLPGRLVGVSVDADGN
TAYRLALQTREQHIRREKATSNICTAQVLPAVLAAMYAVYHGPEGLTEIARRVHGLAAGL
AEALRTAGVEVVHEGFFDTVLTRVPGRAAAVVAAARESGINLGRVDDDHVRIACDEVTTP
EIVDRVLRAFGAAPGIADGRTALPTGLARTSEFLTHEVFHSHRSETAMLRYLRRLSDQDY
ALDRGMIPLGSCTMKLNATAEMEPISWPEFAGLHPFAPAGDAAGYRELIDQLCGWLAEVT
GYDEVSLQPNAGSQGELAGLLAIRAYHRANGQPERDVCLIPSSAHGTNAASAVLAGMRVV
VVACNDNGDVDLDDLRAKAEQHRDALSAIMVTYPSTHGVYEEGIGEIARVVHEAGGQVYV
DGANLNALLGLAKPGEFGGDVSHLNLHKTFCIPHGGGGPGVGPVAVRAHLAPYLPNHPLA
DGAGPATGVGPISAAPFGSASILPISWAYIRMMGGAGLTSATKVAVLAANYVAARLSPHY
PVLYTGRTGLVAHECILDLRALTKRTGVTVDDVAKRLVDYGFHAPTMSFPVAGTLMVEPT
ESEDVSELDRFCDAMIAIRREIEDVAEGRWEIERSPLRNAPHTAEMLTGDWDLPYDRKTA
VYPGGVSPKNKYWSPVRRIDGAHGDRNLVCSCPSIEAYGS
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgccgatcgccacatcggaccttccgagcacgaacaggccaagatgctcgcc
gagtgcgggttcgggagcctggacgcgctggtcgaggccgctgtcccggcgtcgatccgc
accgcgggcgggctggacctgccgccggcctccgagcaggaggcgaccgcgcagctgcgg
gcgctggcggcgaagaaccgcccgatgacccagatgatcggcctcggcttcagcgacacc
gtcaccccgccggtgatccgccgcaacgtgctggagaacccggcctggtacaccgcgtac
acgccgtaccagccggagatctcgcaggggcggctggaggcgctgctcaacttccagacg
atggtctcgaacctgaccggcctggacatcgccaacgcctccctgctcgacgagtccacc
gcggtcgccgaggccgtcctgctcatgcgccgcgcgtcgaaggcgaagtcgtcgcgcgtc
gtgctggacgccgagtgcctgccgcagaccatcgcggtggtgcggacgcgggccgaggcg
gtcggcatcgaggtcgacgtgcgggacctgggcaccgggctgccggaggacttcttcggt
gtcgtcgtgcagtaccccggcgcgtccggcgtgctgcgcggccggggcttctacgaggcg
atcggcaaggtcgccaaggacgcgggcgcgctctacaccgtggccgcggacctgctggcg
ctgacgctggtcaccgcgcccggcgagttcggtgccgacatcgccgccggcaccacccag
cgcttcggcgtcccgctcggctacggcggcccgcacgccgggtacctgtcggtgcgcaag
ggcctggagcggtcgctgcccggccgcctggtcggcgtctcggtggacgcggacggcaac
accgcctaccggctcgcgctgcagactcgtgagcagcacatccgccgcgagaaggcgacc
tcgaacatctgcaccgcccaggtgctgcccgcggtgctggccgcgatgtacgccgtctac
cacgggccggaggggctcacggagatcgcgcggcgggtccacgggctggccgccgggctg
gccgaagcgctgcggaccgcgggtgtggaggtcgtgcacgagggcttcttcgacaccgtg
ctcacgcgggtgccgggccgggccgccgccgtggtcgccgcggcgcgcgagtcgggtatc
aacctcggccgcgtggacgacgaccacgtgcggatcgcctgcgacgaggtcaccaccccc
gagatcgtggaccgcgtgctgcgggcgttcggcgccgcgccgggcatcgcggacggccgc
accgcgctgcccaccgggctggcgcgcaccagcgagttcctgacccacgaggtgttccac
agccaccgctccgagaccgcgatgctgcgctacctgcgccgtctgtccgatcaggactac
gcgctggaccgcggcatgatcccgctcggctcgtgcaccatgaagctcaacgcgaccgcc
gagatggagccgatcagctggccggagttcgccggcctgcacccgttcgccccggccggg
gacgcggccggctaccgcgagctgatcgaccagctgtgcggctggctcgccgaggtcacc
ggctacgacgaggtgtccctgcagcccaacgccggcagccagggcgagctggccgggctg
ctcgccatccgcgcctaccaccgcgccaacggccagccggagcgcgacgtgtgcctgatc
ccgtcgtcggcgcacggcaccaacgccgcgtccgcggtgctcgccgggatgcgcgtggtg
gtggtcgcctgcaacgacaacggtgacgtcgacctggacgacctgcgcgccaaggccgag
cagcaccgcgacgcgttgtccgcgatcatggtgacctacccctccacgcacggcgtgtac
gaggagggcatcggcgagatcgcccgcgtcgtgcacgaggccggcgggcaggtctacgtc
gacggtgcgaacctcaacgcgctgctgggcctggccaagccgggtgagttcggcggcgac
gtgtcgcacctgaacctgcacaagacgttctgcatcccgcacggcggcggcggccccggc
gtcggcccggtcgcggtgcgcgcgcacctcgcgccctacctgcccaaccacccgctcgcc
gacggcgcgggcccggccaccggcgtcggcccgatctcggcggcgccgttcgggtccgcg
tcgatcctgcccatctcgtgggcctacatccgcatgatgggcggcgccgggctgaccagc
gccaccaaggtcgccgtgctcgccgcgaactacgtcgccgcgcggctgtccccgcactac
ccggtgctctacaccgggcgcaccggcctggtggcccacgagtgcatcctcgacctgcgc
gcgctgaccaagcgcaccggcgtgaccgtcgacgacgtcgccaagcgcctggtcgactac
ggcttccacgcgccgaccatgtcgttcccggtcgccgggacgctgatggtcgagccgacc
gagagcgaggacgtcagcgagctggaccggttctgcgacgcgatgatcgccatccggcgg
gagatcgaggacgtcgccgagggccggtgggagatcgagcggagcccgctgcgcaacgcg
ccgcacaccgccgagatgctcaccggcgactgggacctgccctacgaccgcaagaccgcg
gtctacccgggcggggtctcgccgaagaacaagtactggtccccggtccggcgcatcgac
ggcgcccacggtgaccgcaacctcgtctgctcgtgcccgtccatcgaagcctacgggagc
tga
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