Amycolatopsis thermalba: L1857_33645
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Entry
L1857_33645 CDS
T08681
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
athm
Amycolatopsis thermalba
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
athm03400
]
L1857_33645
Enzymes [BR:
athm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
L1857_33645
DNA repair and recombination proteins [BR:
athm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
L1857_33645
Prokaryotic type
L1857_33645
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UQS27391
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All DBs
Position
complement(6945561..6946877)
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AA seq
438 aa
AA seq
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MADLPALLSASERATRVLALYVLDEALLKPAGRPRQAFLYGCLESLAESLDGRLMVVHGD
PVREVPRVARSIGAGSVHVSTDTGPYGRRRDRAVAEALGEIEWVECGSSYAVTPGRITKP
DGEPYRVFSAFYRAWCRHGWRAPAARSEVDWLEPEEPFRLPGIPDLGSMSLPRPGEAAAR
EAWERFLDGGLDGYATDRDRPDRPATTRLSPYLRWGCIHPRTLLAGLDAVRGKDAESLRS
ELAWREFYADVLYHRPETARRNYDSRFDELEYDTDLDAFERWRTGRTGYPIVDAGMRQLL
AEGWMHNRVRMIVASFLVKDLHQPWWLGARHFMNSLVDGDLASNQLNWQWVAGTGTDPAP
FFRVFNPTTQGEKFDPNGDYVRRYVPELREIPGKAVHQPWKLPHPPKNYPSPMVDHAEER
KVALTRFNAINQSAQRSL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
ttggccgacctgcccgccctgctgagcgcgagcgaacgcgccacccgggtactcgcgctg
tacgtgctggatgaagcgctgctgaagccagcgggcaggccacggcaggcgttcctgtac
gggtgcctggagtcgctggcggagagcctggacgggcggctgatggtggtgcacggcgat
cccgtgcgcgaggtgccgcgagtggcccggtcgatcggtgcgggcagcgtgcacgtcagc
accgacaccgggccgtacggacgccgccgggaccgggcggtggccgaggcgctgggggag
atcgagtgggtcgagtgcggttcgtcctacgccgtgaccccgggccgcatcaccaaaccg
gacggcgagccgtaccgggtgttcagcgcgttctaccgggcctggtgccggcacgggtgg
cgcgccccggccgcgcggtccgaagtggactggctcgaaccggaggaaccgtttcgcctg
cccggaatccccgacctgggctcgatgtccctgccgcgcccgggcgaggctgccgcgcgt
gaggcgtgggagaggttcctcgacggcggtctggacggttacgcgaccgaccgcgaccgc
cccgaccggcccgccacgacgcggctgtcgccgtacctgcgctggggctgcatccacccg
cgcacgctgctggccggtctggatgcggtgcgtggcaaggacgccgagtcgctgcgcagc
gagctggcgtggcgcgagttctacgcggacgtgctgtaccaccgcccggaaaccgcgcgg
cggaactacgacagccggttcgacgagctggagtacgacaccgacctggacgctttcgag
cggtggcgcacgggccggacgggctacccgatcgtcgacgcggggatgcggcagctgctc
gcggagggctggatgcacaaccgggtgcggatgatcgtggcgagtttcctggtcaaggac
ctgcaccagccgtggtggctgggcgcgcggcacttcatgaacagtttggttgatggcgac
ctggcgtccaaccagctgaactggcagtgggtggcgggcacgggaacggacccggcgccg
ttcttccgcgtcttcaaccccaccacccagggcgaaaagttcgacccgaacggcgactac
gtgcgacggtacgtgccggaactacgggagattccagggaaagccgtgcaccaaccctgg
aagttgccgcaccccccgaagaactacccgtccccgatggtggaccacgcggaggaacga
aaggtagcgctaacccgcttcaacgcaatcaaccagagcgcgcagcgcagcctttga
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