Amycolatopsis thermalba: L1857_34175
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Entry
L1857_34175 CDS
T08681
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
athm
Amycolatopsis thermalba
Pathway
athm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1857_34175 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
athm03019
]
L1857_34175 (groL)
03110 Chaperones and folding catalysts [BR:
athm03110
]
L1857_34175 (groL)
03029 Mitochondrial biogenesis [BR:
athm03029
]
L1857_34175 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
athm04147
]
L1857_34175 (groL)
Enzymes [BR:
athm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
L1857_34175 (groL)
Messenger RNA biogenesis [BR:
athm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
L1857_34175 (groL)
Chaperones and folding catalysts [BR:
athm03110
]
Heat shock proteins
HSP60 / Chaperonin
L1857_34175 (groL)
Mitochondrial biogenesis [BR:
athm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
L1857_34175 (groL)
Exosome [BR:
athm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
L1857_34175 (groL)
Exosomal proteins of other body fluids (saliva and urine)
L1857_34175 (groL)
Exosomal proteins of breast cancer cells
L1857_34175 (groL)
Exosomal proteins of colorectal cancer cells
L1857_34175 (groL)
Exosomal proteins of bladder cancer cells
L1857_34175 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
UQS27487
UniProt:
A0ABY4P598
LinkDB
All DBs
Position
complement(7050059..7051690)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKLIAFDEDARRGLERGLNTLADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPWEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPIALKRGIE
QAVEAVVEQLHKAAKEVETKEQIAATASISAADRTIGELIAEALDKVGKEGVVTVEESNT
FGLELELTEGMRFDKGYISGYFVTDAERQEAVLEDPYILLFGSKISNVKDLLPVLEKVMQ
SGKPLLIIAEDVEGEALATLVVNKIRGTFKSVAVKAPGFGDRRKAILQDIAILTGGQVIS
EDVGLKLENADLNLLGKARKAVITKDETTIVEGAGDADQIQGRVNQIRAEIEKSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
SKAAFEGLRLSGDEATGANIVKVAVEAPLKQIAVNSGLEGGVVAEKVKGLPEGHGLNAAT
GDYEDLVKAGVIDPAKVTRSALQNAASIAGLFLTTEAVVADKPEKAGAAPAGDPTGGMGG
MDF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggccaaactgatcgcgttcgacgaggacgcccgccgcgggcttgagcggggtctgaac
accctcgccgacgccgtcaaggtgacgcttggcccccgtggccgcaacgtcgtgctcgaa
aagaagtggggcgcgccgacgatcaccaacgacggtgtctccatcgcgaaggagatcgag
ctcgaggacccgtgggagaagatcggggccgagctcgtcaaggaagtcgccaagaagacc
gacgacgtagccggtgacggcaccaccaccgccaccgtgctggcccaggcgctcgtgcgc
gaaggtctgcgcaacgtggccgccggtgccgacccgatcgccctcaagcgtggcatcgag
caggcggtcgaggccgtcgtcgagcagctgcacaaggccgcgaaggaggtcgagaccaag
gagcagatcgctgccaccgcctcgatctcggccgcggaccgcaccatcggtgagctgatc
gccgaggcgctggacaaggtcggcaaggaaggcgtcgtcaccgtcgaggagtcgaacacc
ttcgggctcgagctcgagctcaccgagggtatgcgcttcgacaagggctacatctcgggt
tacttcgtcaccgacgccgagcgtcaggaagccgttctggaggacccgtacatcctcctg
ttcggctcgaagatctcgaacgtcaaggacctgctgccggtcctggagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctggcgaccctg
gtcgtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggctccgggcttcggt
gaccgccgcaaggccatcctgcaggacatcgcgatcctgaccggtggccaggtcatctcc
gaggacgtgggcctcaagctggagaacgcggacctgaacctgctgggcaaggcccgcaag
gccgtcatcaccaaggacgagacgaccatcgtcgagggtgccggcgacgcggaccagatc
cagggccgcgtgaaccagatccgcgccgagatcgagaagtcggactccgactacgaccgc
gagaagctgcaggagcggctggccaagctggccggcggcgtggccgtcatcaaggccggt
gccgccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgttcgcaac
gcgaaggccgccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctccaggcg
tccaaggctgccttcgagggcctgcgcctctcgggcgacgaggcgaccggtgcgaacatc
gtcaaggtcgccgtcgaggctccgctcaagcagatcgcggtcaacagcggtctcgagggc
ggcgtcgtggcggagaaggtcaagggtctgccggagggccacggcctgaacgcggcgacc
ggcgactacgaggacctggtcaaggccggcgtcatcgaccccgccaaggtcacccgttcg
gcgctgcagaacgcggcttcgatcgcgggtctgttcctgaccaccgaggccgtcgtggcc
gacaagccggagaaggctggcgccgctccggcgggcgacccgaccggtggcatgggcggc
atggacttctga
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