Atrimonas thermophila: M15_03090
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Entry
M15_03090 CDS
T10752
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
atho Atrimonas thermophila
Pathway
atho03420
Nucleotide excision repair
atho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
atho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M15_03090
03430 Mismatch repair
M15_03090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atho03400
]
M15_03090
Enzymes [BR:
atho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M15_03090
DNA repair and recombination proteins [BR:
atho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M15_03090
MMR (mismatch excision repair)
Other MMR factors
M15_03090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
ResIII
AAA_11
HHH_3
Motif
Other DBs
NCBI-ProteinID:
BER91565
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All DBs
Position
282622..284580
Genome browser
AA seq
652 aa
AA seq
DB search
MKATRIDYEQELNEEQRKVVFAGDGPTLVIAGAGSGKTRTITYRVAYLVEQGVDFRKILL
VTFTNKAAREMLHRVEGLLGISLEGIWGGTFHHVANIILHREARKVGYQPGYTILDREDQ
KVLLEGCIAEAGIDVRARRFPKADLLGNVISLHRNTFLSIEDILEKYYPQFLEFANAIAG
IFALYQERKREMNIMDYDDLLWYLWTLLKEDEKLRRKYGALFEYVLVDEYQDTNLIQAEI
VDLLSEEHRNLLVVGDDSQSIYSFRGANFANILDFPRKYPDAAVYKLETNYRSTPEILNL
ANKIILHNSQQFYKTLRPVRRSGEKPQVVTAKDVLDQARFVATRILELRQAGYRLNDMAV
LYRAHYQSMELQMELTRRGIPFEVRSGLRFFEQAHIKDVVAYLKIVSNPLDEIAWKRVLK
IYPGIGKVTASRIFERVKESPDPFSALERLVEEKELPANAQKSIQSLAALLLRLEELEAS
PSTMIKEVVSSGYQEYLVTRYPDHRERLLDLEELANFAFQYRSLDAFLNELALLGEMEAE
TIVLGGIPDEKLTLSSIHQAKGLEWDVVFVIWLCEGGFPSSYSLKNKEDVEEERRLFYVA
CTRARDHLFLCYPLLGESSFRDGKFIRKPSRFLRELDPGCYEKVNLTREQLL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaccaggattgactacgaacaggagttgaatgaagaacagcgtaaagtggtt
ttcgcgggcgatggcccaacgctggtcatagctggggcgggttcggggaaaacccgcacc
ataacttatcgagttgcctaccttgtagagcagggtgtcgattttcgcaagattctgctg
gttacctttaccaacaaggctgctcgggagatgctgcatcgggtagaagggcttttgggc
atttctctggagggtatctggggtggtaccttccaccatgttgccaatattattctgcac
cgggaagccaggaaagttgggtatcaacccggatacaccattctggaccgcgaggaccag
aaggttttacttgagggatgtattgctgaggcggggattgatgttcgggctcgacgtttt
ccaaaagcagaccttctgggaaatgttatttccttgcaccgcaatacttttttgagcatt
gaggacattctggaaaagtattaccctcaatttctggagtttgcgaatgccatagctggt
attttcgcactttatcaggaacgcaaacgagagatgaacatcatggattacgatgactta
ctctggtatctatggactctgctcaaggaagatgagaagttgcgtagaaagtacggtgca
ctttttgagtacgtgctggttgatgagtatcaggataccaacctcattcaggctgaaatc
gttgacttgctttctgaggagcaccgcaacctgctggtggtgggagacgattctcagagc
atttactctttccgaggagctaattttgccaatattctggattttccgcgcaaatatcct
gatgctgcggtttacaaactggagaccaattaccggagcactcccgaaattctcaacctt
gccaataaaattattctccacaacagccagcagttttacaagacgctgcgtccggtacga
agaagtggtgaaaagcctcaggtggtaactgcaaaagatgtactggatcaggctcgtttt
gtggctacccggattctggagctgcgtcaggcaggttatcgcttgaacgacatggcagtt
ctctaccgagctcattatcagagcatggaacttcagatggaactgacccgtcgaggtatt
ccctttgaagtgcgctctggattgagattcttcgagcaggctcacatcaaagatgtggta
gcttatctcaagattgtttccaatccgctggatgagattgcctggaaaagagtactcaag
atttacccgggcattggtaaagttactgcttctcgtatctttgagcgggtgaaggaatct
cccgatcccttctcggccctggaacgcttggttgaggaaaaggagctcccagccaacgct
caaaagagcatacagagccttgctgcgcttcttttgcgcttggaagagcttgaagcttct
ccttctactatgattaaagaggttgttagctctgggtatcaggaatatctggtaacccga
tatcccgaccaccgggaacggttgctggatcttgaagaactggctaactttgctttccag
tatcgttctttggatgcgtttttgaatgaactggctctcttgggggaaatggaggcagaa
accatagtgctgggtggtattcctgacgagaaactcactctctccagtattcaccaagct
aaaggcttggagtgggatgtggtttttgttatttggttatgtgagggtgggttcccttct
tcgtacagcttgaaaaataaagaagacgttgaagaagagcgaagacttttttatgtggcc
tgcacccgggcacgggaccacctctttctatgttatcctctccttggtgaaagctctttt
cgggatggcaaatttatccgcaaaccctctcgctttttgagagagctggaccctggatgt
tatgagaaagtaaaccttaccagagagcaactgctgtga
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