Atrimonas thermophila: M15_05450
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Entry
M15_05450 CDS
T10752
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
atho Atrimonas thermophila
Pathway
atho03420
Nucleotide excision repair
atho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
atho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M15_05450 (pcrA)
03430 Mismatch repair
M15_05450 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atho03400
]
M15_05450 (pcrA)
Enzymes [BR:
atho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M15_05450 (pcrA)
DNA repair and recombination proteins [BR:
atho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M15_05450 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
M15_05450 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BER91801
LinkDB
All DBs
Position
524965..527145
Genome browser
AA seq
726 aa
AA seq
DB search
MSEEQAQIVTARERYIKVIAGPGTGKTETLVRRLLYLLLCEDVSPENIIAFTFTEKAAQS
MKNRVYYRLHEWGLDEHIQNLGSMYIGTIHSYCLHLLRQEFGYSDFNVLDENQEFALVFR
IANRFNFPKGATEIDKYYYRQCVNFIDSVNVVHNELIDEQKLQEKSPEFYEDFREYEDFL
DENRLLTFGRMISLTVRKLYCDREKINHVRYLMVDEYQDINKAQQELIQILGEGANVFVV
GDPRQSIYQWRGSDNRFFEEFEQIFPGAKTFYMVRNRRSTPEIVNVANHFYQKFHQKYEL
IRAEKSSKGVALLASLPTAESEARWVVEEITRAVEEGKCRFKDCAILLRSVISNAGPFIR
ELRSRKIPYFLGGKSGLFSREEIKALKDIFFLLLKVKDEGQTPNEEDEVEDISRLQASLD
SWVQAAGIELDKQATLQKLQHWSKKVLEGKYSNLTRAFHRLLVILGYRQLNPDFPLQAVV
MANLGRFSSMLVDFETAMRLGGKKPEWPEIIKYLRLYVFWYAERVYEEQLAEDLPDIDAV
FVGTVHQAKGLEWPVVFVSSVVGHRFPSIRAGKPRPWLISRELFDAERYEGSLEEEQNLF
YVAITRAKEVLCVTAFEGYYRGSLYCRRSPSAFFECLREVVPVLGENQKIPFPEIPQNDE
QKEPRVLSVREVADYLRCFTLPSLLPLAQCVEVPSRTCRRTWLWKKSTQLSFPIAGAFER
RRRKTC
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaggagcaagctcaaatagtcaccgcacgcgagcggtacataaaggtcatcgct
ggtccgggtactggcaagacggaaaccctcgttcgcaggctgctttatctccttctgtgt
gaagacgtgtcaccagaaaatattattgcctttacttttaccgaaaaagccgcacagagc
atgaaaaacagggtgtactaccgtcttcacgagtggggtctcgatgagcatattcagaat
ttgggttccatgtacattggcaccattcactcttattgtttgcatcttttgcgtcaggag
tttggttattccgattttaacgtgcttgatgaaaaccaggaatttgccctcgttttccgc
attgccaacaggtttaatttcccgaaaggggcaacggaaatagacaaatattattaccga
caatgtgttaactttatcgattcggtgaatgtggtgcacaacgagctgattgatgaacag
aaacttcaagaaaaaagccctgagttttatgaagattttcgcgaatatgaggactttctc
gatgaaaatcgcttgcttacttttggcaggatgataagtctgactgttcggaaactttac
tgcgatagagaaaagattaatcacgtgcgttacctgatggtcgacgaataccaggacatt
aataaagcacagcaggagctaattcaaattctgggtgagggagcaaacgtttttgtggta
ggggatccccgacagagtatttatcagtggcggggttcggataaccgcttttttgaagaa
ttcgagcaaatttttccaggagcaaaaactttttacatggtgcgaaatcgaagaagcact
cctgaaattgttaacgtagccaaccatttttaccagaaatttcaccagaaatatgagtta
atacgtgccgagaaaagttcaaagggagttgcacttctcgcatcacttccaacagctgag
agtgaagctcgctgggtggtagaggaaatcaccagagcggttgaggaaggaaaatgccgt
tttaaagactgtgctatcttgcttcgaagtgtaatcagtaatgctgggccgtttataagg
gagctacgttcaagaaaaattccctattttttgggaggcaaatcaggacttttcagcagg
gaagagataaaggctttaaaggatatcttttttctgctcttaaaagtgaaagacgaaggt
cagacgccaaatgaagaggacgaggttgaggatatttcaaggcttcaagcttctttggat
tcctgggtccaagccgcggggatagagcttgataaacaggcaacgttacaaaagttgcaa
cattggagtaaaaaggttttagagggtaaatactcaaatctgacccgggcttttcatcgc
ttgttggtgattcttggttatcgccagctgaatcccgattttcccctgcaggcggtcgtg
atggctaacctggggcgctttagctctatgctggttgattttgaaactgcaatgcgtctg
ggaggaaagaagccagagtggccagaaataatcaagtatttgcgtctatacgttttctgg
tatgccgaacgtgtctatgaagaacagttggctgaagatcttccagatattgatgcagtt
tttgtcggtacagtacatcaggccaaagggcttgaatggccagtggtttttgtttcttca
gtggttggccatcggttcccttcaataagagctggaaaaccgaggccatggcttatttcc
agagagcttttcgatgctgagcgttatgagggaagtctggaggaagagcaaaatttattt
tatgtagctatcacccgagcaaaagaggtgctttgtgttactgcttttgagggttactac
aggggttctttgtactgcaggcgttctcccagcgcttttttcgaatgcttgagagaagtg
gtgccggttttaggagaaaaccaaaaaattccgtttccagagattccccaaaacgacgaa
caaaaagaaccgcgggtgctgtcggttcgtgaggttgctgattatttacgttgctttacg
ttgccctcacttttaccgcttgcgcaatgtgtggaagtaccctccaggacttgcagaaga
acttggttatggaagaagtctacgcaattgtcttttccgattgctggagcttttgagaga
aggcgaagaaaaacttgttaa
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integrated database retrieval system
