Atrimonas thermophila: M15_07520
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Entry
M15_07520 CDS
T10752
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
atho Atrimonas thermophila
Pathway
atho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M15_07520 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atho03019
]
M15_07520 (rny)
Messenger RNA biogenesis [BR:
atho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M15_07520 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Asp_Glu_race
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
BER92008
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Position
complement(724865..726394)
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AA seq
509 aa
AA seq
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MFLAYILLGIAVGTIAGMYIKTLHVKILEQKASRCAQEILEAAHKEAENIKKETLLAAKE
EILREKQSLEEEIQRKRRELQNFESRLLRREENLERKMEQLEKKENQLNELLMETERIKQ
ETEKLKEKEMQELHRIANLSWEEARQEVLTRVEKTLEHEVGLKIKEAEEQAKKESERIAR
EIVTQAIQRYAADFTAENTVSVVTLPSDEMKGRIIGREGRNIRTFEMITGVDLIIDDTPE
AVIISCFDPIRREIARIALEKLILDGRIHPARIEELVEKARIQVEEKMLQEGEQALFDTG
IKNVHPEIVKLLGKLYFRTSYGQNVLQHSKEVAHLAALMAAELGVRVNIAKRAGLLHDIG
KALDHEVDGPHAFIGADVARRYGEKEEIINAIESHHGEAEPGSIEAVLVQAADAISASRP
GARRESLEVYIKRLEQLEKIASSFEGVEKSYAIQAGREVRIIVKPEKLNDAQAAKLAYEV
VKRIEKELEYPGQIKVTVIRETRAVEYAK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtttttggcatatatattgttaggaattgcggtaggaaccatagcgggaatgtatatt
aaaaccttgcacgtcaaaatcctcgaacagaaggcttccaggtgcgcacaggaaattctt
gaggcagcgcacaaagaggcagaaaacatcaaaaaagagactttactcgctgctaaagag
gaaattttaagagaaaagcaatcgctggaagaggaaatacagcgcaagcgtcgggaactt
cagaactttgagagtcgcctcttgcgcagagaagaaaatctggaacgcaaaatggaacaa
ttggagaagaaagaaaaccagctaaacgagcttttgatggaaactgaaagaatcaagcag
gagaccgaaaagctcaaggagaaagagatgcaggaactacaccgcattgccaatctttcc
tgggaagaagcgcgtcaggaggtgctaaccagggttgaaaagactctggaacatgaagtt
ggtttgaaaataaaagaagcagaagaacaggctaagaaggaatcagaaagaattgcgcga
gagattgttactcaagccattcaacgctatgcagccgattttactgctgaaaatactgtt
tccgtggtaactcttcccagcgatgaaatgaaaggcaggattattggtagggaaggacgg
aacattcgcacttttgagatgataaccggtgtagatttgatcattgatgatacacctgaa
gcagttattatttcctgttttgatcccattcgcagggaaattgcccggatagcattggaa
aaactcattctggacggcagaatccaccccgcccggattgaagagctggttgagaaggcg
agaatacaggttgaggaaaagatgcttcaggaaggagagcaagcactgtttgatacgggc
attaagaacgtacacccagaaatagtgaaactccttggcaagctgtattttcgtaccagt
tatggacaaaatgtactgcaacactctaaggaagtggcccatctcgctgctttgatggca
gctgaactgggagtgagggtaaatattgccaaaagagcaggtcttttacacgatattggc
aaagctctggaccacgaagttgacggtccccatgcttttataggtgcggatgtggctcgg
cgctatggagaaaaggaagagatcattaacgctatagaatctcaccatggtgaagcagaa
cccggaagcattgaagcggtgctggtgcaagctgcagatgccatttccgcatccagacct
ggtgcaagacgtgagagtctcgaggtgtatatcaagagattggaacaactggaaaagata
gccagttcttttgaaggagttgagaaatcttacgccatacaggcaggaagagaagtgcgc
attattgtgaaaccagaaaagttgaacgatgcgcaggcagccaaattagcttatgaagtg
gtgaaaaggatagagaaagaacttgaatacccaggacagattaaggttacagtaatcaga
gaaactcgagctgtagaatatgccaaataa
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