KEGG   Atrimonas thermophila: M15_07520
Entry
M15_07520         CDS       T10752                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
atho  Atrimonas thermophila
Pathway
atho03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:atho00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    M15_07520 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atho03019]
    M15_07520 (rny)
Messenger RNA biogenesis [BR:atho03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     M15_07520 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B Asp_Glu_race Exonuc_VII_L
Other DBs
NCBI-ProteinID: BER92008
LinkDB
Position
complement(724865..726394)
AA seq 509 aa
MFLAYILLGIAVGTIAGMYIKTLHVKILEQKASRCAQEILEAAHKEAENIKKETLLAAKE
EILREKQSLEEEIQRKRRELQNFESRLLRREENLERKMEQLEKKENQLNELLMETERIKQ
ETEKLKEKEMQELHRIANLSWEEARQEVLTRVEKTLEHEVGLKIKEAEEQAKKESERIAR
EIVTQAIQRYAADFTAENTVSVVTLPSDEMKGRIIGREGRNIRTFEMITGVDLIIDDTPE
AVIISCFDPIRREIARIALEKLILDGRIHPARIEELVEKARIQVEEKMLQEGEQALFDTG
IKNVHPEIVKLLGKLYFRTSYGQNVLQHSKEVAHLAALMAAELGVRVNIAKRAGLLHDIG
KALDHEVDGPHAFIGADVARRYGEKEEIINAIESHHGEAEPGSIEAVLVQAADAISASRP
GARRESLEVYIKRLEQLEKIASSFEGVEKSYAIQAGREVRIIVKPEKLNDAQAAKLAYEV
VKRIEKELEYPGQIKVTVIRETRAVEYAK
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtttttggcatatatattgttaggaattgcggtaggaaccatagcgggaatgtatatt
aaaaccttgcacgtcaaaatcctcgaacagaaggcttccaggtgcgcacaggaaattctt
gaggcagcgcacaaagaggcagaaaacatcaaaaaagagactttactcgctgctaaagag
gaaattttaagagaaaagcaatcgctggaagaggaaatacagcgcaagcgtcgggaactt
cagaactttgagagtcgcctcttgcgcagagaagaaaatctggaacgcaaaatggaacaa
ttggagaagaaagaaaaccagctaaacgagcttttgatggaaactgaaagaatcaagcag
gagaccgaaaagctcaaggagaaagagatgcaggaactacaccgcattgccaatctttcc
tgggaagaagcgcgtcaggaggtgctaaccagggttgaaaagactctggaacatgaagtt
ggtttgaaaataaaagaagcagaagaacaggctaagaaggaatcagaaagaattgcgcga
gagattgttactcaagccattcaacgctatgcagccgattttactgctgaaaatactgtt
tccgtggtaactcttcccagcgatgaaatgaaaggcaggattattggtagggaaggacgg
aacattcgcacttttgagatgataaccggtgtagatttgatcattgatgatacacctgaa
gcagttattatttcctgttttgatcccattcgcagggaaattgcccggatagcattggaa
aaactcattctggacggcagaatccaccccgcccggattgaagagctggttgagaaggcg
agaatacaggttgaggaaaagatgcttcaggaaggagagcaagcactgtttgatacgggc
attaagaacgtacacccagaaatagtgaaactccttggcaagctgtattttcgtaccagt
tatggacaaaatgtactgcaacactctaaggaagtggcccatctcgctgctttgatggca
gctgaactgggagtgagggtaaatattgccaaaagagcaggtcttttacacgatattggc
aaagctctggaccacgaagttgacggtccccatgcttttataggtgcggatgtggctcgg
cgctatggagaaaaggaagagatcattaacgctatagaatctcaccatggtgaagcagaa
cccggaagcattgaagcggtgctggtgcaagctgcagatgccatttccgcatccagacct
ggtgcaagacgtgagagtctcgaggtgtatatcaagagattggaacaactggaaaagata
gccagttcttttgaaggagttgagaaatcttacgccatacaggcaggaagagaagtgcgc
attattgtgaaaccagaaaagttgaacgatgcgcaggcagccaaattagcttatgaagtg
gtgaaaaggatagagaaagaacttgaatacccaggacagattaaggttacagtaatcaga
gaaactcgagctgtagaatatgccaaataa

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