Atrimonas thermophila: M15_12140
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Entry
M15_12140 CDS
T10752
Name
(GenBank) response regulator transcription factor
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
atho Atrimonas thermophila
Pathway
atho02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
atho00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M15_12140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
atho02022
]
M15_12140
Two-component system [BR:
atho02022
]
NarL family
LiaS-LiaR (cell wall stress response)
M15_12140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_11
HTH_Mga
HTH_7
HTH_29
DUF6706
HTH_40
HTH_10
Motif
Other DBs
NCBI-ProteinID:
BER92470
LinkDB
All DBs
Position
1217722..1218414
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AA seq
230 aa
AA seq
DB search
MVKKMEDTKIAIVDDHALFADGLKALLESKTKIGRCSIFTNSKEAIQKIPLEKPDIVLMD
IHLSDANGIQLAEELKARLPDLKILILTMDASRELLIQAVSAGVNGYLLKTAPFSKITSC
IKAALQGDMVFAEEVSGMLLEEFRKNLPTPKKPSPLLDELSKREKEILTLVAQGKDNQTI
AKELFISEKTVKNYISNILSKLGIENRMKLIVFALEAGILESDETTKQDI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
gtggttaaaaaaatggaggacactaaaatagccattgtggatgaccacgccctttttgct
gacggcttgaaggctctcctggaaagcaaaaccaaaatcggccgctgctctattttcaca
aacagcaaagaagccattcagaaaatacccctcgaaaaaccggacatcgtacttatggat
attcatctttctgatgctaacggcatacagcttgccgaagagctcaaagcccgccttccg
gacctcaagatactgattctcaccatggacgcgtccagagagcttctcatccaggccgtc
tcagcaggagtgaacggttacctcctgaaaactgcacccttctccaaaatcaccagttgc
atcaaagcagctctgcagggggacatggtctttgcggaagaagtctcgggaatgttgctc
gaagagttcagaaaaaacctccccaccccaaaaaaaccctctcccttgctcgatgagctc
agcaagagggaaaaagaaatcctcaccctggttgcccaagggaaagacaaccagaccata
gccaaggagcttttcatcagtgaaaagacggttaaaaactacataagcaacattctttcc
aagctgggcattgaaaacaggatgaagctaatagtctttgccctggaagcaggaattctg
gagtctgatgagaccaccaagcaggatatctga
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