Atrimonas thermophila: M15_15360
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Entry
M15_15360 CDS
T10752
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
atho Atrimonas thermophila
Pathway
atho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
atho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M15_15360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atho03021
]
M15_15360
03400 DNA repair and recombination proteins [BR:
atho03400
]
M15_15360
Enzymes [BR:
atho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M15_15360
Transcription machinery [BR:
atho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M15_15360
DNA repair and recombination proteins [BR:
atho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M15_15360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_3
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BER92792
LinkDB
All DBs
Position
complement(1518123..1519118)
Genome browser
AA seq
331 aa
AA seq
DB search
MYDLKELMKCEIVEVREDIRPPNLYGKFLIEPLEAGWGITIGNALRRVLLSSIEGSAVTA
VQIEGVMHEFSVLPGVREDVSDIVLNLKGLVLKSHSDQEILYLDVKGEPGRVKVVTGADI
QKNSNVEIINPDHYIAEINEEGHLAARIYVARGKGYQEADETRYRELDIIPVDSIFTPVR
KVNYQVLDTRVGQFTNYDKLVVEVWTNGAITPQEAMEKALELLRDNFAYLLELLRERIGE
TGVKADTPEETSEEVEEEIPIEDLDLSVRAINCLKRAKINTLRELLDVVRNRPEDLKKIK
NLGQKTYEEILEKVQQRFLSSGNTEKRGVGE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacttgaaggagctaatgaagtgtgaaattgtggaagttagagaagacatccgg
cctcccaatttgtatggtaaatttttaattgaaccccttgaggctgggtggggtatcacc
attggtaatgctttacgcagagttcttctctcttccatagagggaagcgcagtaacggct
gtgcagatagaaggagttatgcacgaattctctgttcttcctggggtacgggaagacgtt
tcagacattgttttgaatctcaaaggtttagtgctgaagagccattctgaccaggagatt
ctataccttgatgttaagggtgaaccgggccgcgtaaaagtggttactggtgctgatata
caaaaaaatagtaatgtggaaataattaatcctgatcattacatcgctgaaattaacgaa
gagggtcatctggcagccaggatttatgttgctcgtggtaaggggtaccaggaagcagac
gagaccagataccgagaactggatattatcccggtcgattctatttttacaccagtaaga
aaagtaaactatcaggtattggacacacgagttgggcagtttactaactacgacaaattg
gtggtggaagtttggaccaatggagccattactccccaggaagctatggaaaaagctctc
gagcttttgagagataattttgcttaccttttagaacttttgagagagagaattggcgag
acgggagtcaaagcagatactcctgaggaaacttcagaagaggttgaagaagaaattccg
attgaagaccttgatttgtcagttcgagccattaattgtctcaagagggccaagataaat
actctgagagaactcttggatgttgttcgcaatcgacctgaagatttgaaaaagattaag
aacttgggccagaaaacttatgaggaaatccttgagaaagtacagcagcggtttctttct
tcgggcaacactgagaaaagaggtgttggagaatga
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