Atrimonas thermophila: M15_19550
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Entry
M15_19550 CDS
T10752
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
atho Atrimonas thermophila
Pathway
atho00521
Streptomycin biosynthesis
atho00523
Polyketide sugar unit biosynthesis
atho00525
Acarbose and validamycin biosynthesis
atho00541
Biosynthesis of various nucleotide sugars
atho01100
Metabolic pathways
atho01110
Biosynthesis of secondary metabolites
atho01250
Biosynthesis of nucleotide sugars
Module
atho_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
atho00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
M15_19550 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
M15_19550 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
M15_19550 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
M15_19550 (rfbB)
00525 Acarbose and validamycin biosynthesis
M15_19550 (rfbB)
Enzymes [BR:
atho01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
M15_19550 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
Statherin
Motif
Other DBs
NCBI-ProteinID:
BER93211
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All DBs
Position
1965107..1966168
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AA seq
353 aa
AA seq
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MILLVTGCAGFIGSNFVHFYLRSKSECKIIGLDKLTYAGNLENLAPVQQKEKERFIFVRG
DIANTELVEHLFSLYDIDVVVNFAAESHVDRSIDNPQVFLQTNVMGTQNLLEVARKNWLQ
KDKSTQNKKFIQISTDEVYGTLGPEGRFTEESPLCPRSPYAASKAAADLLARSYWVTYGL
PVVITRCCNNYGPYQFPEKLIPFMIWNALKHQELPIYGDGRQIRDWLYVLDHCRALALVI
EKGKPGEVYNIGAQEERENLEVVHKILAILQKKTGDPLINEKLIRHVKDRPGHDRRYALE
VSKIEKELGWKKEISFEEGLEKTVEWYLNHHQWLERVISGEYLDFYQKWYRKR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgattttactggtaaccggatgcgcaggatttatcggcagtaatttcgtacacttctac
ctgcgttcaaaatccgaatgcaaaattattggcctcgataaactgacctacgctggtaat
ctggaaaacctggccccagtgcaacaaaaagaaaaagagcgcttcatttttgtgcgggga
gatattgccaacacagagcttgtggaacatttgttttctctttacgacatcgatgtggtg
gtcaactttgctgcggagtctcacgtagaccgctccattgacaatcctcaagtttttctg
caaaccaatgtcatgggaactcagaatctactggaagtggccagaaaaaattggctccag
aaagacaaatcaacacagaataaaaaattcattcaaatctctactgatgaagtctatggc
actctgggtcccgagggtcgatttactgaagaaagccctctttgtccccgaagcccctac
gcagccagcaaggcagctgcggacttattggcccgttcttactgggttacctatggtctc
ccggtagtcataacccgctgctgtaataactacgggccgtatcagtttccggaaaagctc
atcccttttatgatctggaacgccctcaaacatcaggaacttcccatttatggtgacgga
aggcaaatccgggattggctttatgtactcgaccactgccgtgctctggccctggtgatt
gaaaaaggaaaaccgggagaagtgtacaatataggagcccaggaagaacgagaaaatctg
gaagtggtgcacaaaattctggcaattcttcagaagaaaactggagatccgcttataaat
gaaaaactaatccgtcacgtaaaggaccgcccgggtcatgaccggcgctatgcattggag
gtaagtaagatagaaaaagagttggggtggaaaaaagaaatctcctttgaagaaggactg
gaaaagactgtggagtggtacctcaaccaccaccagtggttagagcgggtgatatccgga
gagtatctggatttttaccagaaatggtatcggaaaagataa
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