KEGG   Aliarcobacter thereius: ATH_0003
Entry
ATH_0003          CDS       T07638                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
athr  Aliarcobacter thereius
Brite
KEGG Orthology (KO) [BR:athr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:athr03032]
    ATH_0003 (gyrB)
   03400 DNA repair and recombination proteins [BR:athr03400]
    ATH_0003 (gyrB)
Enzymes [BR:athr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     ATH_0003 (gyrB)
DNA replication proteins [BR:athr03032]
 Prokaryotic type
  DNA Topoisomerases
   ATH_0003 (gyrB)
DNA repair and recombination proteins [BR:athr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      ATH_0003 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: QBF15103
LinkDB
Position
2556..4877
AA seq 773 aa
MSQQEYGASNIKVLKGLEAVRKRPGMYIGDTNINGLHHLIYEVVDNSIDEAMAGYCKNIK
ITLTKDGRAKIEDDGRGIPTAIHPTEGVSAATIALTVLHAGGKFDKDTYKVSGGLHGVGV
SVVNALSKDLKMTIYREGKIHQQIFSEGIPKNTLEIIGDSPRKTGTTIDFLVDDTIFEVT
RYEFAILAKRFKEVAYLNPFITITLEDENIGKKEVYHFEGGIKQFVEDLNKDTALCEVIS
FSDKVDGVEVDIALIYNDTYIEKTLSFVNNIRTIDGGTHEAGFKAGLTRSISKYLNENAS
AREKDVKITGDDVREGLITVVSVKVPEPQFEGQTKGKLGSSYVRPITQKLTGDNLDKYFE
ENPVHAKAIMEKALMAARGREAAKKARELTRKKDSISIGTLPGKLADCQSKDPAIKELYL
VEGDSAGGSAKQGRDRVYQAILPLKGKILNVEKSRLDKILKSDEIRNIITALGCGIGEDF
DDEKIRYHKIIIMTDADVDGSHIQTLLLTFFFRFLKPIVEKGYLYIAQPPLYRYKKGKNE
IYLKDNAALSSYLIENGLESFEFQGMGYNDLLDLFKQVARYRAMLEQLAKRYSLLEVLKH
LIENSNLVNLEFVDLYEKVKEFIESKGHNILSKVITEDKIQLFVQTKEGLEELIIDNDLF
ASPYFSESTFIFNKLKDRDLTLFEGRDLIELLEEIENLAKKGAYIQRYKGLGEMNPEQLW
ETTMTPDNRRLLRVKIEDAEIASDTFTLFMGDEVEPRRNYIESHAKEVEHLDV
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgtcacaacaagaatatggtgcaagtaatattaaagttttaaaaggtcttgaagctgtt
agaaaaagacctggaatgtatattggtgatacaaatataaatggacttcaccacttaatt
tatgaagttgttgataactctattgatgaagcaatggctggatattgtaaaaatatcaaa
attactttaacaaaagatggaagagcaaaaatagaagatgatggaagaggaattccaact
gcaattcatccaacagaaggagtaagtgcagcaactattgctttaacagttcttcacgct
ggtggaaagtttgataaagatacttataaagtttcaggaggacttcacggagttggagtt
tctgttgtaaatgctttatcaaaagatttaaaaatgactatttatagagaaggaaaaatt
caccaacaaatatttagtgaaggtattccaaaaaatactcttgaaattattggagatagt
cctagaaaaacaggaacaacaattgattttttagtagatgatactatttttgaagttaca
agatatgaatttgctattcttgctaaaagatttaaagaagttgcatatttaaacccattt
attacaattactcttgaagatgaaaatattggtaaaaaagaagtttatcattttgaaggt
ggaattaaacagtttgttgaagatttaaataaagacacagctctatgtgaagtaatttca
tttagtgataaagttgatggagtagaagttgatattgctttaatatataatgatacttac
attgaaaaaactctatcttttgtaaataatattagaacaatagatggtggaactcacgaa
gcaggatttaaagctggacttacaagaagtatttctaaatatttaaatgaaaatgcaagt
gcaagagaaaaagatgtaaaaattacaggtgatgatgtaagagaaggattaattacagtt
gtttcagttaaagttccagaaccacaatttgaaggtcaaacaaaaggaaaattaggaagt
tcttatgtaagaccaattactcaaaaattaactggagataatttagataaatattttgaa
gaaaatccagttcatgcaaaagctattatggaaaaagctttaatggcagcaagaggaaga
gaagcagctaaaaaagcaagagaacttactagaaaaaaagattcaattagtataggaaca
cttccaggaaaacttgctgattgtcaaagtaaagatccagcaattaaagagctatattta
gtggaaggggattcagctggaggttcagcaaaacaaggtagagatagagtttatcaagca
atattgcctctaaaaggtaaaattctaaatgttgaaaaatctagacttgataaaattcta
aaatctgatgaaattagaaatattattactgcacttggttgtggaattggtgaagatttt
gatgatgaaaaaataagatatcataaaattataattatgaccgatgccgatgttgatggt
agccatattcaaactttacttctaacatttttctttagatttttaaaaccaatagttgaa
aaaggttatttatatattgctcaaccaccactttatagatataaaaaaggtaaaaatgaa
atttatctaaaagataatgctgctttatcttcatatctaatagaaaatggtttagagagt
tttgaatttcaaggaatgggttataatgaccttttagatctatttaaacaagttgcaaga
tatagagcaatgcttgaacaacttgcaaaaagatattcacttttagaagtattaaaacac
ttaattgaaaatagtaatttagtaaatttagagtttgttgatttatatgaaaaagtaaaa
gagtttattgaatcaaaaggacataatattttatcaaaagttataactgaagataaaatt
caactatttgttcaaactaaagagggacttgaagagttaattatagataatgatcttttt
gcatctccatattttagtgaatctacatttatttttaataaattaaaagatagagattta
actctttttgaaggtagagatttaatagaattattagaagagatagaaaatcttgctaaa
aaaggtgcatatattcaaagatataaaggtcttggagagatgaatccagagcaactttgg
gaaacaacaatgacaccagataatagaagactattaagagtaaaaattgaagatgcagag
attgctagtgatacatttactctatttatgggagatgaagttgaacctagaagaaactat
attgaatctcatgcaaaagaagttgaacatttagatgtttaa

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