Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA gyrase, subunit B
|
KO |
|
Organism |
athr Aliarcobacter thereius
|
Brite |
KEGG Orthology (KO) [BR:athr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:athr03032]
ATH_0003 (gyrB)
03400 DNA repair and recombination proteins [BR:athr03400]
ATH_0003 (gyrB)
Enzymes [BR:athr01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ATH_0003 (gyrB)
DNA replication proteins [BR:athr03032]
Prokaryotic type
DNA Topoisomerases
ATH_0003 (gyrB)
DNA repair and recombination proteins [BR:athr03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ATH_0003 (gyrB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2556..4877
|
AA seq |
773 aa
MSQQEYGASNIKVLKGLEAVRKRPGMYIGDTNINGLHHLIYEVVDNSIDEAMAGYCKNIK
ITLTKDGRAKIEDDGRGIPTAIHPTEGVSAATIALTVLHAGGKFDKDTYKVSGGLHGVGV
SVVNALSKDLKMTIYREGKIHQQIFSEGIPKNTLEIIGDSPRKTGTTIDFLVDDTIFEVT
RYEFAILAKRFKEVAYLNPFITITLEDENIGKKEVYHFEGGIKQFVEDLNKDTALCEVIS
FSDKVDGVEVDIALIYNDTYIEKTLSFVNNIRTIDGGTHEAGFKAGLTRSISKYLNENAS
AREKDVKITGDDVREGLITVVSVKVPEPQFEGQTKGKLGSSYVRPITQKLTGDNLDKYFE
ENPVHAKAIMEKALMAARGREAAKKARELTRKKDSISIGTLPGKLADCQSKDPAIKELYL
VEGDSAGGSAKQGRDRVYQAILPLKGKILNVEKSRLDKILKSDEIRNIITALGCGIGEDF
DDEKIRYHKIIIMTDADVDGSHIQTLLLTFFFRFLKPIVEKGYLYIAQPPLYRYKKGKNE
IYLKDNAALSSYLIENGLESFEFQGMGYNDLLDLFKQVARYRAMLEQLAKRYSLLEVLKH
LIENSNLVNLEFVDLYEKVKEFIESKGHNILSKVITEDKIQLFVQTKEGLEELIIDNDLF
ASPYFSESTFIFNKLKDRDLTLFEGRDLIELLEEIENLAKKGAYIQRYKGLGEMNPEQLW
ETTMTPDNRRLLRVKIEDAEIASDTFTLFMGDEVEPRRNYIESHAKEVEHLDV |
NT seq |
2322 nt +upstreamnt +downstreamnt
atgtcacaacaagaatatggtgcaagtaatattaaagttttaaaaggtcttgaagctgtt
agaaaaagacctggaatgtatattggtgatacaaatataaatggacttcaccacttaatt
tatgaagttgttgataactctattgatgaagcaatggctggatattgtaaaaatatcaaa
attactttaacaaaagatggaagagcaaaaatagaagatgatggaagaggaattccaact
gcaattcatccaacagaaggagtaagtgcagcaactattgctttaacagttcttcacgct
ggtggaaagtttgataaagatacttataaagtttcaggaggacttcacggagttggagtt
tctgttgtaaatgctttatcaaaagatttaaaaatgactatttatagagaaggaaaaatt
caccaacaaatatttagtgaaggtattccaaaaaatactcttgaaattattggagatagt
cctagaaaaacaggaacaacaattgattttttagtagatgatactatttttgaagttaca
agatatgaatttgctattcttgctaaaagatttaaagaagttgcatatttaaacccattt
attacaattactcttgaagatgaaaatattggtaaaaaagaagtttatcattttgaaggt
ggaattaaacagtttgttgaagatttaaataaagacacagctctatgtgaagtaatttca
tttagtgataaagttgatggagtagaagttgatattgctttaatatataatgatacttac
attgaaaaaactctatcttttgtaaataatattagaacaatagatggtggaactcacgaa
gcaggatttaaagctggacttacaagaagtatttctaaatatttaaatgaaaatgcaagt
gcaagagaaaaagatgtaaaaattacaggtgatgatgtaagagaaggattaattacagtt
gtttcagttaaagttccagaaccacaatttgaaggtcaaacaaaaggaaaattaggaagt
tcttatgtaagaccaattactcaaaaattaactggagataatttagataaatattttgaa
gaaaatccagttcatgcaaaagctattatggaaaaagctttaatggcagcaagaggaaga
gaagcagctaaaaaagcaagagaacttactagaaaaaaagattcaattagtataggaaca
cttccaggaaaacttgctgattgtcaaagtaaagatccagcaattaaagagctatattta
gtggaaggggattcagctggaggttcagcaaaacaaggtagagatagagtttatcaagca
atattgcctctaaaaggtaaaattctaaatgttgaaaaatctagacttgataaaattcta
aaatctgatgaaattagaaatattattactgcacttggttgtggaattggtgaagatttt
gatgatgaaaaaataagatatcataaaattataattatgaccgatgccgatgttgatggt
agccatattcaaactttacttctaacatttttctttagatttttaaaaccaatagttgaa
aaaggttatttatatattgctcaaccaccactttatagatataaaaaaggtaaaaatgaa
atttatctaaaagataatgctgctttatcttcatatctaatagaaaatggtttagagagt
tttgaatttcaaggaatgggttataatgaccttttagatctatttaaacaagttgcaaga
tatagagcaatgcttgaacaacttgcaaaaagatattcacttttagaagtattaaaacac
ttaattgaaaatagtaatttagtaaatttagagtttgttgatttatatgaaaaagtaaaa
gagtttattgaatcaaaaggacataatattttatcaaaagttataactgaagataaaatt
caactatttgttcaaactaaagagggacttgaagagttaattatagataatgatcttttt
gcatctccatattttagtgaatctacatttatttttaataaattaaaagatagagattta
actctttttgaaggtagagatttaatagaattattagaagagatagaaaatcttgctaaa
aaaggtgcatatattcaaagatataaaggtcttggagagatgaatccagagcaactttgg
gaaacaacaatgacaccagataatagaagactattaagagtaaaaattgaagatgcagag
attgctagtgatacatttactctatttatgggagatgaagttgaacctagaagaaactat
attgaatctcatgcaaaagaagttgaacatttagatgtttaa |