Aliarcobacter thereius: ATH_0559
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Entry
ATH_0559 CDS
T07638
Symbol
truD
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
athr
Aliarcobacter thereius
Brite
KEGG Orthology (KO) [BR:
athr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
athr03016
]
ATH_0559 (truD)
Enzymes [BR:
athr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ATH_0559 (truD)
Transfer RNA biogenesis [BR:
athr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ATH_0559 (truD)
Prokaryotic type
ATH_0559 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
FERM_F2
Motif
Other DBs
NCBI-ProteinID:
QBF15633
LinkDB
All DBs
Position
534362..535423
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AA seq
353 aa
AA seq
DB search
MQIQRYLNHSNIDVYFKQSKDDFVVHEVPLYEFSKEGEHLILKLRKKDLATWDAIEILAN
FLKCSPREFGYAGLKDKNAMTVQHISIHRKYEEALKEFSHENIKILETTYHNNKIKIGHL
KGNNFFIRLKRVGLVEKQKIEEALGKIATFGMPNYFGFQRFGIDGENYKKGKAIVEGDLK
ERNRNLKQMFINAYQSYLFNSWLSKRIEISKLIDSFDAKEIYEKLNLPLEEVKRAKKQPH
PFKIFTGDLLSHYPFGRIFIIDDLEIESQKFFDKDRVPTGLLSGKRVKKSEAFAQNIEKE
FDVEMSEDGARRFAFIFPENIESNYKEDKNHMELNFYLPKGSYATELIAEILH
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaattcaaaggtatttaaatcattcaaatattgatgtctattttaaacagagtaaa
gatgattttgttgttcatgaagtaccactttatgaatttagtaaagaaggagaacatctt
attttaaagctaagaaaaaaagacttagcaacttgggatgcaatagagattttggcaaat
tttttaaaatgtagtccaagagagtttggatatgctggattaaaagataaaaatgcaatg
acagttcaacatatttcaatacatagaaaatatgaagaagctttaaaagagtttagtcat
gaaaatataaaaattcttgagacaacatatcataacaataagataaaaatagggcattta
aaaggaaataatttttttattagattaaaaagagttggtcttgtagaaaaacagaaaata
gaagaagctttaggaaaaattgctacttttggaatgccaaattattttggttttcaaaga
tttggaattgatggtgaaaattataaaaaaggtaaagcgatagttgaaggagatttaaaa
gagagaaatagaaatttaaaacagatgtttataaatgcttatcaaagttatctttttaac
tcttggctttcaaaaagaatagagatttcaaaacttattgactcttttgatgcaaaagaa
atttatgaaaaattaaatttaccactagaagaagtaaaaagagcaaaaaaacagccacat
ccttttaaaatttttacaggagatttattaagtcattatccatttggaagaatttttatt
attgatgatttagagatagagagtcaaaagttttttgataaagatagagttccaacaggt
cttttatctggaaagagagttaaaaaaagtgaagcttttgcacaaaatattgaaaaagaa
tttgatgtagaaatgagtgaagatggagcaagaaggtttgcatttatttttcctgaaaat
attgaaagtaattataaagaagacaaaaatcatatggaacttaatttttatcttccaaaa
ggttcatacgcaacagaacttatagcagagattttacactag
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