Aliarcobacter thereius: ATH_0900
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Entry
ATH_0900 CDS
T07638
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
athr
Aliarcobacter thereius
Brite
KEGG Orthology (KO) [BR:
athr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
athr03400
]
ATH_0900 (phrB)
Enzymes [BR:
athr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ATH_0900 (phrB)
DNA repair and recombination proteins [BR:
athr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ATH_0900 (phrB)
Prokaryotic type
ATH_0900 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF4250
DUF6115
Ribosomal_S25
Motif
Other DBs
NCBI-ProteinID:
QBF15969
LinkDB
All DBs
Position
877216..878568
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AA seq
450 aa
AA seq
DB search
MKQILWFRRDLRVDDNAILSNAKDEVLAIFIFDKNILNKLEKDDKRVTFIYQSVLELKKN
LQKIGLDLAIFYETPKDVFTKLKKDGFDEILTSIDFDDYAKKRDDEISNILPIKRFIDSF
LIDPKDILKPNKTPYKLFTAFYNSLEFLHDSNSIKEFEIPKKLKKIDFNYNFIPTLEDLG
FIKQKLPNFLYRSADELIDIFSKKIQNYQKDRDYFYLDASSNLSVHLRFGLISPRTLFNR
IKKLNSPKEEIAFYIRELFWREFYNYILYYFPKSQFENLNGIEINWNENEEDFIKWCKGE
TGVPIIDASMKYLNQTGLMHNRLRMIVSSYLTKNLLIDWKKGEKYFALKLLDYEASSNIG
SWQWAASTGVDSVPYFRVFNPYLQSKKFDKDAVFIKSVLEELKDISPKIIHIENGIQENI
FLNYPRQIVGISYSRNRAIFEFKKLKPFKI
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaatactatggtttagaagagatttaagagtagatgataatgctatattatca
aatgcaaaagatgaagttttagcaatatttatatttgataagaatattctaaataagcta
gaaaaagatgataaaagagttacttttatatatcaaagtgttttagaattaaaaaagaac
ttacaaaaaatagggcttgatttagcaatattttatgaaacaccaaaagatgtttttaca
aaactaaaaaaagatggttttgatgaaattttaacttcaatagattttgatgactacgca
aaaaaaagagatgatgagatttcaaatatcttacctataaaaagatttattgattcattt
ttaattgatccaaaagatattttgaaaccaaataaaacaccatataaactctttacagct
ttttataactctttagagttcttacatgattcaaatagtataaaagagtttgaaattcct
aaaaaattaaaaaaaatagattttaattataactttattccaactcttgaagacttagga
tttataaaacaaaaattaccaaattttttatatagaagtgcagatgagttaatagatatt
ttttcaaaaaaaatccaaaattatcaaaaagatagagattatttttatttagatgctagt
tcaaatttatctgttcatttaagatttggacttatttctcctagaactttatttaataga
atcaaaaaattaaattcaccaaaagaagagatagctttttatattagagagctgttttgg
agagaattttataactatattttatactattttccaaaatcacaatttgaaaatttaaat
ggtatagaaataaactggaatgaaaatgaagaagattttataaaatggtgcaaaggagaa
acaggagttcctattattgatgctagtatgaaatatttaaatcaaacaggacttatgcat
aatagattaagaatgatagtttcttcatatctaacaaaaaatttactcattgattggaag
aaaggagaaaaatattttgctttgaaacttttggattatgaagcaagttcaaatattggt
tcgtggcagtgggctgctagtacaggagttgatagtgtaccttattttagagtttttaat
ccttacttacaatcaaaaaaatttgataaagatgctgtttttataaaaagtgtcttagaa
gaacttaaagatatatcaccaaaaataatacatatagaaaatggtattcaagaaaatata
tttttgaactatccaaggcaaattgttgggatatcttattcaagaaatagggctatcttt
gaatttaaaaaattaaagccctttaagatataa
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