Aliarcobacter thereius: ATH_1220
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Entry
ATH_1220 CDS
T07638
Symbol
hup2
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
athr
Aliarcobacter thereius
Brite
KEGG Orthology (KO) [BR:
athr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
athr03032
]
ATH_1220 (hup2)
03036 Chromosome and associated proteins [BR:
athr03036
]
ATH_1220 (hup2)
03400 DNA repair and recombination proteins [BR:
athr03400
]
ATH_1220 (hup2)
DNA replication proteins [BR:
athr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ATH_1220 (hup2)
Chromosome and associated proteins [BR:
athr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ATH_1220 (hup2)
DNA repair and recombination proteins [BR:
athr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ATH_1220 (hup2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_1
Transposase_21
HU-CCDC81_euk_2
HU-CCDC81_bac_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QBF16271
LinkDB
All DBs
Position
1183900..1184181
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AA seq
93 aa
AA seq
DB search
MNKNEFIDAVAEKSGLTKKDSKAAVDAVLETITEALVKKDSVAFVGFGTFLVGQRAARVA
QVPGTGKTVNVPATTVAKFKVGKALKEAVASSK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatgaatttattgatgcagttgcagaaaaaagtggtttaacaaaaaaagac
tcaaaagctgctgttgatgctgtattggaaactattacagaagctttagttaaaaaagat
tcggttgcatttgttggatttggaacattcttagtaggacaaagagctgctagagttgca
caagttccaggaactggaaaaactgtaaatgtacctgctacaactgttgctaaatttaaa
gttggaaaagctttaaaagaagcagttgctagttctaaataa
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