Azospirillum thiophilum: AL072_01505
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Entry
AL072_01505 CDS
T04091
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ati
Azospirillum thiophilum
Pathway
ati03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ati00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AL072_01505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ati03021
]
AL072_01505
03400 DNA repair and recombination proteins [BR:
ati03400
]
AL072_01505
Enzymes [BR:
ati01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AL072_01505
Transcription machinery [BR:
ati03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AL072_01505
DNA repair and recombination proteins [BR:
ati03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AL072_01505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Biotin_lipoyl_2
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ALG69820
UniProt:
A0AAC8ZTE6
LinkDB
All DBs
Position
1:complement(322771..326943)
Genome browser
AA seq
1390 aa
AA seq
DB search
MNELMNIFGQVQGPQSFDQIRIQIASPERIRSWSYGEIKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRMKYRGIICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLKSL
PSRIGLLLDMTLKDLERILYFENYVVIEPGLTPLKLHSLLNEEEFLNAQDEYGEDSFTAS
IGAEALRIMLSALDLDEEKKRCREDLRDTNSEAKRKKLVKRLKLIDAFLASQSRPEWMIL
EVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELKAPDIIVRNEKRML
QEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELKLHQCGLPKKMALELFKPFIYAKLELYGLASTIKAAKRMVEKERPEVWDILEEVIREH
PVMLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDIVLGIYYISMDRPSEMGEGMVFSTVSEIEQALNA
KVLSIHAKIKARYVGVDDEGEEKISIVETTPGRMLLSELLPRHPKVPFSLINRVLTKKDV
GNVIDAVYRHCGQKETVIFADRLMKLGFGHACRAGISFGKDDMVIPEAKGRLVNESKERV
KEFEQQYLDGLITQGEKYNKVVDVWSECTEKVASEMMKAISTTEAGKQVNSVYMMAHSGA
RGSAAQIRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKT
ANSGYLTRRLVDVAQDAIIVEHDCGTERGITVKAVIDGGEVISPLGDRILGRTVVGDVID
PLNGELLIEDGGLIDEPTVDRIERSGIDSVKIRSVLTCETRDGVCAKCYGRDLARGTLVN
TGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEQSQIEAAFDGIVRINNRNIVMNSS
GIPVVMGRSTEVILLDDQGRERARHRVPYGAKLLADEGVKVERGAKLAEWDPYTLPIITE
RAGTARYIDLVEGISMREVMDEATGISSKVVVDWRQQPRGADLKPRIALVDDRGDLITLP
NGLEARYFMSVDAILSVENGAEVRAGDVLARIPRESSKTRDITGGLPRVAELFEARRPKD
FAIISEMSGRVEFGKDYKTKRRIVVRNEESGDEKEYLIPKGKHISVQEGDYVERGDLLMD
GNPVPHDILAVMGVEALADYLINEIQDVYRLQGVKINDKHIEVIVRQMLQKVEITDAGET
TFLVGEQVDRQEFDEENEKTVGEGLQPASGHPVLQGITKASLQTRSFISAASFQETTRVL
TEAAVGGKVDNLEGLKENVIVGRLIPAGTGSVVNRLKLIAAERDREAALEAGAPEETPAL
PTPGEESTAA
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagttgatgaacattttcggccaggttcaggggccgcagagcttcgatcagatc
cgcatccagatcgcgagtccagagcggatccggtcctggtcctacggcgagatcaagaag
ccggaaaccatcaactaccgcaccttcaagccggagcgtgatggcctgttctgcgcccgc
atcttcggcccgatcaaggactacgagtgcttgtgcggcaagtacaagcgcatgaagtat
cgcggcatcatctgcgagaagtgcggcgtcgaggtcacgctgtcgaaggtccggcgcgag
cgcatgggccatatcgagctggcgtcccccgtcgcgcacatctggttcctgaagtcgctg
ccgagccgcatcggcctgctgctcgacatgacgctcaaggatctggagcgcatcctctat
ttcgaaaactatgtcgtcatcgagccgggcctcaccccgctgaagctgcattcgctgctg
aacgaggaagagttcctgaacgcccaggacgagtatggcgaggattccttcaccgcgtcg
atcggtgccgaagcgctgcgcatcatgctgtctgcgctcgacctcgacgaggagaagaag
cgctgccgtgaggatctgcgcgacaccaactccgaggccaagcgcaagaagctggtcaag
cgcctgaaactgatcgacgccttcctggcctcgcagtcgcgccccgaatggatgatcctg
gaagtcattccggtgatcccgcccgagctgcgtccgctggtgccgctggacggcggccgc
ttcgccacgtccgacctgaacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctg
aagcggctgatcgagctgaaggcgccggacatcatcgtccgcaacgagaagcgcatgctg
caggaggccgtcgacgcgctgttcgacaacggccgccgtggccgcgtcatcaccggcgcc
aacaagcgtccgctgaagtcgctgtcggacatgctgaagggcaagcagggccgcttccgc
cagaacctgctcggcaagcgcgtcgattactccggccgttcggtcatcgtcgtcggtccg
gagctgaagctgcaccagtgcggcctgccgaagaagatggcgctggagctgttcaagccc
ttcatctacgccaagctcgagctgtacggcttggcctcgaccatcaaggccgccaagcgg
atggtggagaaggaacgtcccgaggtctgggacatcctggaggaggtcatccgcgagcat
ccggtgatgctgaaccgggcgccgacgctgcaccgtcttggcatccaggcattcgagccg
acgctgatcgagggcaaggcgatccagctgcacccgctggtctgcaccgccttcaacgcc
gacttcgacggcgaccagatggccgtccacgttccgctgtcgctggaagcgcagttggaa
gcgcgcgtcctgatgatgtcgaccaacaacatcctgtcgcccgccaacggcaagccgatc
atcgtgccgtcccaggacatcgtgctcggcatctactacatctccatggaccgcccgagc
gagatgggcgaggggatggtgttctccaccgtctcggagatcgagcaggcgctgaacgcc
aaggtcctgtcgatccacgccaagatcaaggcgcgctatgtcggcgtcgatgacgagggc
gaggagaagatctccatcgtcgagacgacgccgggccgcatgctgctgtccgagctgctg
ccgcgccatccgaaggtgcccttctcgctgatcaaccgcgtcctgaccaagaaggacgtc
ggcaacgtcatcgacgccgtctaccgccattgcggccagaaggagacggtgatcttcgcc
gaccggctgatgaagctgggcttcggccacgcctgccgcgccggcatctcgttcggcaag
gacgacatggtgatcccggaggccaagggccgcctggtcaacgagtcgaaggagcgggtc
aaggagttcgagcagcagtatctcgacggcctgatcacccagggcgagaagtacaacaag
gtcgtcgacgtctggtcggaatgcaccgagaaggtcgcttccgagatgatgaaggcgatc
tcgaccaccgaagccggcaagcaggtcaattcggtgtacatgatggcccactccggtgcg
cgtggttccgccgcgcagatccgtcagctggccggcatgcgcggcctgatggccaagccg
tcgggcgagatcatcgagacgccgatcatctcgaacttcaaggaaggcctgaccgtgctg
gagtacttcaactccacccacggcgcccgcaagggtctggccgacaccgccttgaagacg
gcgaactccggttacctcacccgccgtctggtcgacgtggcgcaggacgccatcatcgtc
gagcatgattgcggcaccgagcgcggcatcaccgtcaaggcggtgatcgacggcggcgag
gtcatctcgccgctgggcgaccgcatcctcggccgcacggtggtcggcgacgtgatcgat
ccgctgaacggcgagctgttgatcgaggacggcggcctgatcgacgagccgacggtcgac
cgcatcgagcggtcgggcatcgactcggtcaagatccgctctgtcctgacctgcgagacc
cgcgacggcgtgtgcgccaagtgctacggccgtgatctggcccgcggcacgctggtgaac
accggcgaggcggtcggcgtcatcgcggcgcagtcgatcggcgagccgggcacccagctg
accatgcgcaccttccacatcggcggtgcggcgcagcgcggtgccgagcagagccagatc
gaagcggcgttcgatggcattgtgcggatcaacaaccgcaacatcgtcatgaactcctcg
ggcattccggtcgtcatgggccgcagcaccgaagtgatcctgctcgacgatcagggccgc
gagcgggcgcgtcaccgcgtgccgtacggtgccaagctgctggcggacgagggcgtgaag
gtcgagcgcggcgccaagctggccgagtgggacccctacaccctgccgatcatcaccgag
cgcgccggtaccgcccgctacatcgacctcgtggaaggcatctccatgcgcgaggtgatg
gacgaggcgacgggcatcagctccaaggtggtggtcgactggcgccagcagccgcgtggt
gcggacctcaagccgcgcatcgcgctggtggatgatcggggcgacctgatcaccctgccg
aacggcctggaagcccgctacttcatgtcggtggacgcaatcctgtcggttgagaacggc
gccgaggtccgggccggcgacgtgctggcccgtatcccgcgcgaatcctccaagacccgc
gacatcacgggcggtctgccgcgcgtggccgagctgttcgaggcgcgccgtccgaaggac
ttcgcgatcatctcggagatgagcggccgcgtcgagttcgggaaggactacaagaccaag
cgccgcatcgtcgtccgcaacgaggagagcggcgacgagaaggagtatctgatcccgaag
ggcaagcacatctccgtgcaggaaggcgattacgtcgagcgcggcgacctgctgatggac
ggcaacccggtgccgcacgacatcctggcggtgatgggcgtcgaggccctggccgattac
ctgatcaacgagatccaggacgtctaccggctgcagggcgtgaagatcaacgacaagcac
atcgaggtgatcgtccgccagatgctgcagaaggtcgagatcaccgacgccggcgagacc
accttcctggtgggcgagcaggtcgaccgccaggagttcgacgaggagaacgagaagacc
gtcggcgagggcctgcagcccgcgtcgggtcatccagtgctccagggcatcaccaaggcc
agcctgcagacgcggtccttcatctcggccgcgtcgttccaggaaaccacgcgcgtcctc
acggaagcggccgtcggcggcaaggtcgacaacctggaaggcctgaaggagaacgtcatc
gtcggccgcctgatcccggccggcacgggctcggtggtgaaccgcctgaagctgatcgcc
gccgagcgtgaccgcgaagcggccctggaagccggcgcgccggaggaaactccggccctg
ccgaccccgggcgaggaaagcaccgcggcctga
DBGET
integrated database retrieval system
