Azospirillum thiophilum: AL072_05160
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Entry
AL072_05160 CDS
T04091
Name
(GenBank) DNA helicase UvrD
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ati
Azospirillum thiophilum
Brite
KEGG Orthology (KO) [BR:
ati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ati03400
]
AL072_05160
Enzymes [BR:
ati01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AL072_05160
DNA repair and recombination proteins [BR:
ati03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AL072_05160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ALG70394
UniProt:
A0AAC8VVT2
LinkDB
All DBs
Position
1:complement(1125139..1128681)
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AA seq
1180 aa
AA seq
DB search
MTDTLGNSATDLLARTLPPDPNVAQRQASDPTASVWVGASAGSGKTKVLTDRVLRLMLAG
TPPARILCLTFTKAAAAEMAIRINRTLGLWATLPDDGLEDRLADLCGERPSVEARLNARR
LFAQVVDCPGGMKIQTIHAFCQSLLRRFPLEAELAPHFDVMDDRTADGLLTEARDAVLHA
GRTEPDRPLGRAMARLTADLNAEDFAGLLAELAGQRGQIEKLLESHGGLDGLVDAIHDTL
NVPPGVTEESILAHACHDDRCDPPALREACRALSGGSAGDQERGIAIQQWLDAADRRVRA
FEAYKRLFLTAEGSPRKTLITKKPATACPQALAALQKEAERLVEIAERVKAAGVAASTTA
LLTLAQAMLEAYRERKAARALLDYDDLILAANRLLGGKDGTAARVPWVLYKLDGGLDHIL
IDEAQDTNPDQWAIVAALAGEFFAELEAAAPDGKIRTVFAVGDEKQSIFSFQRADPAEFA
RMRCHFQDKAETAERLWSGVDLDISFRSTSAVLETVDAVFAIDRARDGVASDASPVIRHR
AFRRGQAGLVELWPPVKPAEVVETTAWAPPVAREATDSPSARLASVIAATVHRWIDSGER
LEAKGRPVQPGDVMVLVRRRTAFVTELVRALKDRGVPVAGVDRMVLTEQLAVMDLVALAD
FLLLPDDDLTLATVLKGPLIGLTEEELFRVAHGRRGTLWRALVALAETEPDFRPARRYLG
DLLARTDFSAPYELFAGLLNRPCPADTRSGRRAILKRLGPDAQDPLEEFLAVCLAFEKTE
PPSLQNFLAWLAASDAEIKRELEQGGGTVRIMTVHGSKGLQAPIVFLPDTLGSPTQSPPI
LWPDESCPVPLFAARRSQEDALSAEARARANRRRDQEYRRLLYVALTRAEDRLYICGHQG
KREPSDDCWYRLVEEAMRGNGVPHPFDFTGLCPDGWAGEGWRLVGAQTAAVPRHVESEDS
ITAAPPPPWIAEPAPVEPEPSRPLTPSRPDGEEPAARSPLGADDGQRFRRGLLVHRLLQT
LPTLAEAAREAACRRFLARPAHQLTAEQQDAIARETLAVLSHAEFAHLFGPDSRAEVPLV
GVVALGDGSRALAGRIDRLALAGDTVWIADYKTNRPPPRDLEDVPMVYRRQMAAYREALR
AVYPGRRVRCVLLWTDGPFTMELPPSLLDAAAAGLAPRAG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacactctcggcaatagcgcgaccgacctgctcgcccgcaccctgccgcccgac
cccaacgtggcacagcggcaggcgtccgatccgaccgcctcggtgtgggtgggggcgtcg
gccggctcgggcaagaccaaggtgctgaccgaccgggtgctgcggctgatgctggccggg
acgccgccggcgcgcatcctgtgcctgaccttcaccaaggcggccgccgcggagatggcg
atccgcatcaaccgcacgctgggcctgtgggcgaccctgcccgacgacgggctggaggac
aggctggccgacctgtgcggcgaacggccgtcggtcgaggcgcggctgaatgcaaggcgg
ctgttcgcccaggtggtcgactgccccggcggcatgaagatccagaccatccacgccttc
tgccagtcgctgctgcgccgcttcccgctggaagccgaactggcgccgcatttcgacgtg
atggacgaccgcaccgccgacgggctgctgaccgaggcgcgcgacgccgtgctccacgcc
ggccggaccgagccggaccgcccgctcggccgcgccatggctcggctgaccgccgacctg
aacgccgaggatttcgccggcctgctggccgaactggccggccagcgcgggcagatcgag
aagctgctcgagtcccatggcggcctggacgggctggtcgacgccatccacgacaccctc
aacgtgccgcccggcgtcaccgaggagtcgatcctcgcccatgcctgccacgacgaccgc
tgcgacccgccggccctgcgcgaggcctgccgggcgctgtccggcggcagcgccggcgac
caggagcgcggcatcgccatccagcagtggctggacgccgccgaccgccgggttcgcgcc
ttcgaggcctacaagcgcctgttcctgaccgccgagggcagcccgcgcaagacgctgatc
accaagaagccggcaaccgcctgtccccaggcgctggccgccctgcagaaggaggcggag
cggctggtcgagatagcggagcgggtgaaggccgccggggtcgccgcctccaccaccgcg
ctgctgacgctggcgcaggcgatgctggaggcctaccgcgagcgcaaggcggcgcgcgcg
ctgctggattacgacgacctgatcctggcggccaaccggctgctgggcggcaaggacggc
acggcggcgcgggtgccctgggtgctctacaagctggacggcggcctggaccatatcctg
atcgacgaggcgcaggacaccaaccccgaccagtgggccatcgtcgccgcgctcgccggt
gagttcttcgccgagctggaggcggcggcccccgacggcaagatccgcaccgtcttcgcg
gtgggcgacgagaaacagtcgatcttcagcttccagcgcgccgatccggcggaattcgct
cgcatgcgttgccatttccaggacaaggctgaaacggcggaacggctgtggtcgggggtg
gatctcgacatctccttccgctcgacatccgcggttctggagacggtggacgccgtgttc
gccatcgaccgcgcccgcgacggcgtggcgtccgacgccagcccggtcatccgccaccgc
gccttccgccgcggacaggccggcctggtcgagctgtggccgccggtgaagccggcggag
gtggtggagacgacggcctgggcgcctccggtggcccgcgaagccaccgattcgccgtcg
gcccgcctcgcctcggtcatcgcggcgacggtgcatcgctggatcgacagcggggaaagg
ctggaggccaagggccggccggttcagcccggcgacgtcatggtgctggtccgccgccgc
accgccttcgtcaccgaactggtccgcgcgctgaaggaccgcggcgtgccggtggccgga
gtcgaccgcatggtgctgaccgaacagctcgccgtcatggatctggtggcgctggccgac
ttcctgctgctgccagacgacgacctgacattggccaccgtgctgaagggaccgctgatc
ggcttgaccgaggaggagctgttccgcgtcgcccatggccggcgcggcacgctgtggcgc
gcgttggtggcgctggcggagaccgagccggatttccgcccggcccggcgctatctgggc
gacctgctggcacgcaccgacttctcggcaccctatgagctgttcgccggcctgctgaac
cggccctgcccggccgacacccgctcgggacgccgggcgatcctgaagcggctcggcccc
gacgcgcaggatccgctggaggaattcctggccgtctgcctcgccttcgagaagacggaa
ccgccgtcgctgcagaatttcctcgcctggctggcggccagcgacgcggagatcaagcgc
gagctggaacagggcggcggcaccgtgcggatcatgaccgtccacgggtccaaggggttg
caggcgccgatcgtcttcctgcccgacacgctgggcagcccgacccagagcccgccgatc
ctgtggccggacgagtcctgcccggtgccgctgttcgccgcacggcgcagccaggaggac
gcgctgagcgccgaggcgcgggcacgggccaaccggcggcgcgaccaggaataccgccgg
ctgctctatgtcgcactgacgcgggccgaggaccggctctacatctgcggccaccagggc
aagcgcgagccgtccgacgactgctggtaccggctggtcgaggaggcgatgcgcgggaac
ggcgtgccgcatcccttcgacttcaccggcttgtgccccgacggctgggccggcgagggc
tggcggctggtcggcgcccagaccgccgcggtgccgcgccatgtcgagagcgaggacagc
atcaccgcggccccgccaccgccctggatcgccgagccggcgccggtcgagccggaaccg
tcgcgccccctcaccccgtcgcgccccgatggcgaggagccggcggcgcgctccccgctc
ggtgccgacgacggccagcgcttccgccgcggtctgctggttcaccggctgctgcagacc
ctgcccactctggccgaggcggcgcgggaggccgcctgccgccgcttcctcgcccggccg
gcgcaccagttgaccgccgaacagcaggacgccatcgcgcgcgagacgctggcggtgctg
agccatgcggagttcgcgcatctgttcggcccggactcgcgggcggaggtgccgctggtc
ggcgtggtggcgctgggcgacggcagccgggcgctggccgggcgcatcgaccggctggcg
ctggccggggacacggtgtggatcgccgactacaagaccaaccggccgcctcctcgggat
ctggaagacgttccaatggtttaccgccgtcagatggcggcctaccgcgaggcgctgcgc
gccgtttaccccggccgccgggtgcgttgcgtgctgctgtggaccgacggtcccttcacc
atggaactgccgccttccctgctcgacgcggcggcggccgggctggcgccgcgggcggga
tga
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