Azospirillum thiophilum: AL072_08980
Help
Entry
AL072_08980 CDS
T04091
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ati
Azospirillum thiophilum
Pathway
ati03420
Nucleotide excision repair
ati03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ati00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AL072_08980
03430 Mismatch repair
AL072_08980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ati03400
]
AL072_08980
Enzymes [BR:
ati01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AL072_08980
DNA repair and recombination proteins [BR:
ati03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL072_08980
MMR (mismatch excision repair)
Other MMR factors
AL072_08980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
sCache_2
AAA_11
AAA_22
DUF3553
DEAD
Motif
Other DBs
NCBI-ProteinID:
ALG71023
UniProt:
A0AAC8VWY3
LinkDB
All DBs
Position
1:1939726..1942071
Genome browser
AA seq
781 aa
AA seq
DB search
MSDAYDDDPLSHAAPPAASSAAMAAAVQRFAYLDGLNPTQRAAVEALDGPVLVLAGAGTG
KTRVLTTRLAHLLMTRRAAAFQILTVTFTNKAAREMRERVAHLMGIEPEGWWLGTFHALA
ARILRRHAELVGLKSNFTILDTDDQVRLIKQLLEAENIDSKKWPARQVLGAIERWKDRGL
TPDRLADSDGGDVAGGRVVAIYRAYQDRLRTLNACDFGDLLLHNLSIFQGHPDVLAEYHR
KFRYILVDEYQDTNVAQYLWLRILSQAHKNICCVGDEDQSIYAWRGAEIGNILRFETDFP
GATIVKLEQNYRSTGHILAAASGLIANNQGRLGKTLWTEADGGEPVKVKAVWDGEEEARW
VGEEIEALQRKGTPLSQIAVLVRAGFQTREFEERFITLGLPYKVLGGPRFYERQEIRDAM
AYFRVVNSSDDDLAFERIVNLPKRGVGPAAMQTLYTAARARGLSLTDAGWLLTETDELKP
KLRATLRGLLQDFFRWRTLMATVPHTELARSILDESGYTRMWQEDKTPEAPGRLENLKEL
ITAMAEFENLPGFLEHVALVMENAEAAGIEQVTVMTLHGAKGLEFDRVFLPGWEEGVFPN
QRALDETGIAGLEEERRLAYVGLTRARRRAYVSHAANRRLYGSWVSSIPSRFVDELPQDN
VEIEAANGLFAGSGGRGAFAGGAAGYGTGGMGGAMGGGFQFRGSTRQAPAPKTITLDQGA
YAAAPRPRPDAPFAKGARVFHQKFGYGTVIAVAEDKLEIEFDHSGAKKVMDSFVVPADKA
T
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgcgtacgacgacgatccgctgagccacgccgctccccctgcagcctcttcc
gccgccatggcggccgcggtgcagcgcttcgcctatctggacgggttgaacccgacccag
cgggcggcggtggaggcgctggacggtccggtgctggtgctggccggcgccggcaccggc
aagacgcgggtgctgaccacccggctggcccatctgctgatgacgcgccgcgccgccgcc
ttccagatcctgacggtgaccttcaccaacaaggctgcccgcgagatgcgcgagcgcgtc
gcccacctgatggggatcgagccggagggctggtggctcggcaccttccatgcgctggcc
gcccgcatcctgcgccgccatgccgagctggtcgggctgaagtcgaacttcaccatcctc
gacacagacgatcaggtccggctgatcaagcagctgctggaagccgagaacatcgattcc
aagaaatggccggcccgccaggtgctgggtgccatcgaacgctggaaggaccgcggcctg
acccccgaccgcctcgccgacagcgacggcggcgacgtggccggcggccgggtagtggcg
atctaccgcgcctaccaggatcggctgcgcaccctgaacgcctgcgacttcggcgacctg
ctgttgcacaacctgtcgatcttccagggccacccggacgttctggccgagtatcaccgc
aagttcaggtatatcctggttgacgagtaccaggacaccaacgtcgcccagtatctctgg
ctgcgcatcctgtcgcaggcgcataagaatatctgctgcgtcggtgacgaggaccagtcg
atctatgcctggcgcggtgccgagatcggcaacatcctgcgcttcgagaccgactttccc
ggcgccaccatcgtcaagctggagcagaactaccgctcgaccggccatatcctggccgcc
gcctccggcctgatcgccaacaaccagggccgcctcggcaagaccctctggaccgaggcc
gacggcggcgagccggtgaaggtcaaggcggtttgggacggcgaggaggaggcgcgctgg
gtcggcgaggagatcgaggcgctgcagcgaaagggcacgccgctgtcgcagatcgccgtc
ctggtccgcgccggcttccagacccgcgagttcgaggagcgcttcatcacgctgggcctg
ccctacaaggtgctcggcggaccgcgcttctacgagcggcaggaaatccgcgacgcgatg
gcctatttccgcgtggtgaattccagtgacgacgacctcgccttcgaacgcatcgtcaac
ctgcccaagcgtggagtcggccccgcggcgatgcagaccctctacaccgcggcgcgggcg
cgcgggctgtcgctgaccgatgccggctggctgctgaccgaaacggacgagctgaagccg
aagctgcgcgccacccttcgcggcctgctgcaggatttcttccgctggcggacgctgatg
gcgacggtgccgcacaccgagcttgcccgcagcatcctggacgagtccggctacacccgc
atgtggcaggaggacaagacgcccgaggcgcccggacggctggagaacctgaaggaactg
atcaccgccatggcggagttcgagaacctgccgggcttcctggagcatgtcgcgctggtg
atggagaatgccgaggccgccgggatcgagcaggtcacggtgatgaccctgcacggcgcc
aaggggctggagttcgaccgcgtcttcctgccgggctgggaggagggcgtgttccccaac
cagcgcgcgctggacgagaccggcatcgccgggctggaggaggagcggcggctggcctat
gtcggcctgacccgcgcgcgccgccgcgcctatgtcagccatgccgccaaccggcggctc
tacggcagctgggtcagctccatcccgtcgcgcttcgtcgacgagctgccgcaggacaat
gtggagatcgaggcggcaaatggcctgttcgccggcagcggcgggcgcggcgcctttgcc
ggcggggccgcaggctatggtaccggcggaatgggcggggcaatggggggcggcttccag
ttccgcggctccacccggcaggctccggcgcccaagaccatcacactcgaccagggcgcc
tatgccgcggcgccgcgtccgcggcccgacgcgcccttcgccaagggggcgcgcgtgttc
catcagaaattcggttacggcaccgtcatcgcggtggcggaggacaagctggagatcgag
ttcgaccattccggtgccaagaaggtgatggacagcttcgtcgtccccgccgacaaggcg
acctga
DBGET
integrated database retrieval system
