Azospirillum thiophilum: AL072_11600
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Entry
AL072_11600 CDS
T04091
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ati
Azospirillum thiophilum
Brite
KEGG Orthology (KO) [BR:
ati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ati03016
]
AL072_11600
Enzymes [BR:
ati01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AL072_11600
Transfer RNA biogenesis [BR:
ati03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AL072_11600
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ALG71455
UniProt:
A0AAC8ZU94
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All DBs
Position
1:complement(2511728..2512918)
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AA seq
396 aa
AA seq
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MTLITTTDALQAFCQSLAGAEFITVDTEFLREKTYWPQLCLVQIGGPDSAVAIDPLAEGI
DLTPLFALMSDASVLKVFHAARQDVEIFWHLSGQIPHPLFDTQVAAMVCGFGESVGYETL
VTKLAGARIDKSSRFTDWSHRPLTERQLTYALSDVIHLRPAYEKLKRRLARSGRSHWLEE
EMAILTDPKTYRVDPESSWMRLKVRTNKPRFMAILKELAAWREREAQRRDQPRSRVLRDE
ALLEIAAHAPTTVDDLARTRGLGRGFAEGRQGTDVMAAVQAGLDLPDSALPRVEPREEPP
PGLQPIVELLRVLLKMKCDENNVAAKLVASSADLEALAADDSADIPAMQGWRRELFGNDA
LALKHGKIGLAVIERRVRIVPAGEPRPVAVPAESET
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcatcacgacaaccgacgccctgcaggccttctgtcagtcactggcaggggcc
gaattcatcacggtcgataccgagttcctgcgggaaaagacctattggccccaactgtgc
ctcgtccagatcggcgggcccgacagtgcggtcgccatcgacccactggcggaaggaatc
gacctgacgcctctgttcgcgctgatgagcgatgcgtcggtcctcaaggtgttccacgcc
gcccgccaggacgtggaaatcttctggcacctttccggtcaaattccgcacccgctgttc
gacacccaggtcgccgcgatggtctgcggcttcggcgagagcgtcggatatgagaccctg
gtcaccaagctggcaggcgcccgcatcgacaagtccagccgattcaccgactggtcgcac
cgcccgctgaccgagcggcagttgacctacgcgctttccgacgtcatccacctgcgccct
gcctacgagaagctgaagcgccgcctcgcgcggtccggccggtcgcactggctggaggaa
gagatggcgatcctgaccgacccgaagacatatcgggttgatccggaaagttcctggatg
cggctgaaggtccggaccaacaagccccgcttcatggcgatcctgaaggagctggcggcg
tggcgcgagcgtgaggcccagcgccgggatcagccgcggtcccgcgtgctgcgcgacgag
gcgctgctggagatcgccgcccacgcccccaccaccgtcgacgacctcgcccgcacccgc
gggctcggccgcggtttcgccgaagggcggcaagggaccgacgtgatggctgcggtgcag
gcgggactcgacctgccggacagcgccctgccccgcgtcgaaccgcgcgaggagccgccg
cccggactgcagcccatcgtcgaacttctgcgcgtcctgctgaagatgaagtgtgacgag
aacaacgtcgcggcgaagctggtggcgtcctcggccgatctggaggcgctggccgccgat
gattccgccgatattccggcgatgcagggatggcggcgcgaactgttcggcaatgatgcg
ctggcgctgaagcacggaaagatcggtttggcggtcatcgaacgtcgcgtccgcatcgtt
cctgctggggaaccgcgcccggttgccgtgccggccgaatcggaaacttga
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