Azospirillum thiophilum: AL072_12405
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Entry
AL072_12405 CDS
T04091
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
ati
Azospirillum thiophilum
Pathway
ati03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ati00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AL072_12405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ati03400
]
AL072_12405
DNA repair and recombination proteins [BR:
ati03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL072_12405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
HHH_5
GIY-YIG
UVR
HHH_2
DUF7508
DUF5741
Motif
Other DBs
NCBI-ProteinID:
ALG71586
UniProt:
A0AAC8VYK9
LinkDB
All DBs
Position
1:complement(2684551..2686473)
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AA seq
640 aa
AA seq
DB search
MTADGTAGGAVLAGEAAARPKRRPADIGRGVEIIREHLKTLPQTPGVYRMLAGDGAVLYV
GKARNLKRRVTNYTQVGKLPVRLQRMVAETETMEFVNTHTEVEALLLESNLIKKLMPRYN
VLLRDDKTFPHIMITKDHDYPQLTKHRGARGRDADYFGPFASAGAVNRTITALQRAFLLR
NCADTVFASRTRPCLQYQIKRCTAPCVGRVTPAEYQAQVGEARAFLSGKSRDIQTEFAGK
MMAASDAMDFEAAARYRDRIRALTAIQAHQDINVEGVVEDADVIAAYAEGGVTCIQVFFF
RGGRNYGNRAYFPSHDKSAETDEVLSAFIAQFYENKAAPPLVLVSHALPELELLTEALAV
RAGQKVELAEPKRGEKRRLIEHALTNAREAHGRRLAESSSQARLLEGVAAAFGMDAAPER
VEVYDNSHIQGAHAIGGMIVAGPDGFIKNAYRKFNIRTEGAAGDDFAMMREVLTRRFGRA
VKEDPERSLGSWPDLVLIDGGLGQLNVALEVFAELGIDDVTLVGIAKGPDRDAGREHFLM
ENRPPFQMEPRDPVLYFLQRLRDEAHRFAIGTHRAKRTKAIGKSPVDEIAGIGPARKKAL
LHHFGSGAAVARAGLADLESVEGINRTVAKKIYDHFHPDG
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagacgggaccgccggcggcgcagtgctggccggtgaggccgcagcgcgcccg
aagcggcggccggccgacatcggccgcggcgtcgagatcatccgcgagcatctgaagacc
ctgccgcagacgcccggcgtctaccgcatgctggcgggcgacggggcggtgctctatgtc
ggcaaggcgcgcaacctgaagcgccgggtgaccaactacacccaggtcggcaagctgccg
gtcaggctccagcgcatggtcgccgagaccgagacgatggagttcgtcaacactcacacc
gaagttgaggcactgcttctcgaatcgaacctgatcaagaagctgatgcccaggtacaac
gtgttgttgcgggatgacaagacctttccgcacatcatgatcaccaaggaccacgattat
ccgcagctgaccaagcaccggggcgcgcgtgggcgggacgccgactatttcgggcccttc
gcttcggccggcgccgtgaaccgcaccatcacggcgctgcagcgcgccttcctgctgcgc
aactgcgccgacaccgtctttgccagccgcacccggccctgcctgcaataccagatcaag
cgctgcaccgcgccctgcgtcggccgtgtcaccccggcggaataccaggcgcaggtcggc
gaggcgcgcgccttcctgtcgggcaagagccgcgacatccagactgaattcgccgggaag
atgatggcggcctccgacgccatggatttcgaggcggcggcgcgctaccgcgaccggatc
cgggcgctgacggcgatccaggcacaccaggacatcaatgtcgagggggtggtggaggat
gccgacgtcattgccgcctatgccgagggcggcgtgacctgcatccaggtcttcttcttc
cgcggcgggcgcaactacggcaaccgcgcctatttccccagccacgacaagtcggcggag
accgacgaggtgctgtcggccttcatcgcccagttctacgagaacaaggccgccccgccg
ctggtgctggtcagccacgccctgccggagctggagctgctgaccgaggcgctggcggtg
cgtgccggccaaaaggtggagctggccgagcccaagcgcggcgagaagcgccggctgatc
gagcatgcgctgaccaacgcgcgcgaggcgcatggccggcggctggccgaaagctcgtcg
caggcgcggctgctggagggggtggcggcggccttcggcatggacgcggcaccggaacgg
gtggaggtctacgacaactcccacatccagggggcgcacgcgatcggtgggatgatcgtc
gccgggccggacggcttcatcaagaacgcctaccgcaagttcaacatccgcaccgagggg
gcggccggcgacgatttcgccatgatgcgcgaggtgctgacccgccgattcggccgcgcg
gtgaaggaggatccggaacgcagcctgggcagctggcccgatctggtgctgatcgacggc
gggctgggccagctgaacgtcgcgctggaggtgttcgccgagctggggatcgatgacgtg
acgctggtcggcatcgccaagggaccggaccgcgacgccggccgcgagcatttcctcatg
gagaaccggccgcccttccagatggagccgcgcgacccggtgctgtatttcctgcagcgg
ctgcgcgacgaggcccaccgcttcgccatcggcacccaccgggccaagcgaaccaaggcc
atcggcaagtcaccggtcgacgagatcgccggaatcgggccggcgcggaagaaggcgctg
ctgcatcatttcggcagcggggcggcggtggcgcgcgccgggctggccgatctggaatcg
gtggaagggatcaatcgcaccgttgcgaaaaagatatacgatcacttccatcccgatggt
tag
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