Actinotignum timonense: CYJ17_0000805
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Entry
CYJ17_0000805 CDS
T09485
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
atim
Actinotignum timonense
Pathway
atim02020
Two-component system
atim02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CYJ17_0000805
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CYJ17_0000805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atim03000
]
CYJ17_0000805
Transcription factors [BR:
atim03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
CYJ17_0000805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HTH_24
GntR
MarR_2
Sigma70_r4
Xre-like-HTH
HTH_3
YfeC-like
HTH_36
TrmB
Motif
Other DBs
NCBI-ProteinID:
WOT00200
LinkDB
All DBs
Position
195657..196334
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AA seq
225 aa
AA seq
DB search
MDTSVLRTVPLFKDMDEESLAALGAMMSDTSLKRGESLFHEGDQGDRLYIVTDGKVKLSH
TSDDGRENLLAVLGPGEIIGELSLFDLGARSSTVTAIAPTHLLSLAHRDMKNFIEEHPAL
AMSMLREMARRLRNTNENLADLVFSDVPGRVAKALLDLANRFGERTPEGVYVAHDLTQEE
LAHLVGASRETVNKSLADFVSRGWIRLEGRAVLLLEIGRLQRRAH
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggataccagcgttttacgaaccgtgccccttttcaaggacatggatgaggaaagtctc
gccgctctcggcgcgatgatgagcgatacgtccctcaagcggggcgaatcccttttccac
gaaggcgaccagggtgatcgcctttacatcgtcaccgacggcaaggtgaagctcagtcac
acgtccgacgacgggcgcgaaaatctgctcgccgttctcggacccggggaaatcatcggt
gaactttcgctctttgacctgggggctcgttcctccaccgtcaccgctattgcgccgacg
catctgctttccctcgcgcatcgcgatatgaagaattttatcgaggagcaccccgcgctg
gccatgtcgatgctccgtgaaatggcgcgtcgcctgcgcaataccaatgagaatcttgcc
gacctggtgttctcggacgttcccggccgcgtggcgaaggcgctgctcgacctggccaat
cgtttcggcgagcgcacccccgaaggcgtgtacgtggcgcacgacctcacgcaggaagag
ctcgcgcacctcgtgggtgcctcgcgtgaaacggtcaataagtctctggctgattttgtt
tcccgcgggtggattcggctcgaaggtcgcgccgtgctgctcctggagattggccgcttg
cagcgccgcgcccactag
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integrated database retrieval system
