Actinotignum timonense: CYJ17_0001515
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Entry
CYJ17_0001515 CDS
T09485
Name
(GenBank) SdrD B-like domain-containing protein
Organism
atim
Actinotignum timonense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
SdrD_B
CarboxypepD_reg
NOMO1-like_9th
Gram_pos_anchor
SpaA
CarbopepD_reg_2
Motif
Other DBs
NCBI-ProteinID:
WOT00328
LinkDB
All DBs
Position
complement(359277..363794)
Genome browser
AA seq
1505 aa
AA seq
DB search
MQKLKTGAARSRVAAHRLITGAVAALIAAFVAVGGAIPLTAPAMAANVRVTTNGDNAANT
TGETTNATGENTENSENAERAAEAASARLEVAVAEPADQKTNGVKSGALASYDVQWSCAG
VQGQCENTTLSVTIPGLVDSISDTDQLPLTHVSATNSSHDQSAVPVREGDTYTWNLGTVP
VGTTGAMRVQVRPENLRWPEGEAIHPKVAGETNGLVADPVELATPVHATPTIAVRKFAPE
SQPAIGGQYTYTITAGYEGAFNTNENKFQDPGTGTPGLMGLTEIRLVDTLPEGAEFVRAT
NGGTYDPATRAVTWVVPGSPVVRAIADYRVTVAFPAGTFAEGASATNNVQATGTPLDPKH
AAVTATDSVTRQLQNLRAEGNFRKTANKAVTQRDGEASWDISWSNTGNVPLRVHVADNLP
CRYVSPETPGACATPALRNVKAGLVRPLRKNVPATVTYTTTSGKQLSVVVDPTTTRDFPL
TVPAGEEITSIALDVDVVNGERSDITLEIRGTVVADFPADVHNGTTAPDGATYSYAPRYE
VPTLENRAVVTAQSLDFEGNPTPDLPAKITTRESAAQVAIVDGYPTYGVSKTSHLGGQMV
GNLDTKPGELFQTGQTYTFGLGFYTGKGAKLYPVIMDLLAPGMEYDPTQQITTSANWPAT
LPLDKMRVETEMKTVDGKQRQLVRFTWPEDGTGDYFAPPSTGDQSRSNSSEMVLYFGAKI
TAATEPGENTNDMILADAKRPNLGTAVAPNQCIRNWWARTDSRKLTDNLDGLNRPEARGC
TTSTKFNVAGLPALAGKNYVKGDVDTEFQANPNYGTVSPASNAELKLDLVNNGNAGVSGV
VAYDVLPYPGDHGVSGANTPENERGSTWRPRLNGPLTFGEGTPQPTSVLYSTSINPCRGE
VMELGAAQDSSPQNCEPGTWKTAEELGGDFSQVRAFRVEFPQDAKLTRADTWTINANVTA
PAAARGIAWNSYAVTGKNAETGAPVMPTEPAKVGLTMPFDLDLTKENIHAKSADLGVLSE
KVTADPAHAGLAEGVQLADIEKQNETERWATGSVVEYVVRAKNAGPGFATGVEITDMLPK
GVTYVGYWSTNGGYDAATGTWSINDTVTEVVDPHTGDPVEGADPSATDDAYLRFTHERGI
APGGEEVLHLYAVVDETARSQQVCNEALTPAKDRLDSKGQKFAGKQANACLTVGVNLGDR
IFEDTNNNGADDPGEPGLAGVTVKVFRPGDTEPFITTTTDASGKYLVRGLEPGTYSVVVD
RATLPKREGTWETTHVREGSGDKEKASSGQITLSTADVLDADFGFHYVAPVPPVPPQPPV
PPEPPVPPAPEPTTPEPTTPAPAPSPTTTAPAPQPTTDRAQPDPEPTPSATTTEPAPPAP
QPTTPEPVPTTTAPAPGPQPTTPEPSAPEPTVPAPSSPEPSAPEVTTPVPSTPVPTASTT
APAPQGSPSTDGPAASSTPSANPTPPAQAGSGPRLPHTGAGVLGAAGAVLALLAGGVLVL
RRRVE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaattaaaaacgggagcggcgcgttcgcgagtcgcggcgcaccggttgatcacg
ggtgcggtggcggcgcttattgccgccttcgtcgcggtgggcggagcgattccgctgacc
gcgccggccatggccgcgaacgtgcgagtcacaacgaatggtgacaacgccgcaaacacc
accggcgaaactaccaacgccaccggcgaaaacactgaaaactccgaaaacgccgagcgt
gccgcggaagcggcctcggcccgcctggaagtcgcggtggccgaacccgccgaccagaaa
accaacggcgtgaaatccggcgccctggccagctatgacgtgcaatggtcctgcgccggc
gtgcaaggtcaatgcgagaacaccactctcagcgtgaccatccccggcctggtcgattcc
atttccgataccgatcagctccccctcacccacgtgagcgccaccaattcttcccatgac
caatccgcagtcccggtgcgcgaaggcgatacctacacctggaacctgggcaccgtgccg
gtgggaaccaccggcgccatgcgcgtgcaggtacgcccggaaaacctgcgctggcccgaa
ggcgaagcgatccacccgaaggtggccggcgaaacaaacggcctggtagccgacccggtg
gaactggccaccccggttcacgccacccccaccatcgcggttcgtaaattcgctcccgaa
tcccagccggccatcggcggccagtacacctacaccattaccgccggttacgaaggcgcc
ttcaataccaacgaaaacaaattccaggatccgggcaccggcacgcccggcctcatgggc
ctcaccgagatccgcctggtcgataccctgcccgaaggtgcggaattcgtacgtgctacc
aatggcggcacctacgatccggccacccgcgccgtcacctgggtggttcccggctcaccc
gtcgtgcgcgccatcgcagattaccgcgtcacggtcgccttccccgcaggtaccttcgct
gaaggtgccagcgccaccaacaatgtgcaagccaccggcaccccgctcgatcccaagcac
gcggccgtcaccgccaccgattccgtgacccgccagctgcaaaacctgcgtgccgaaggc
aatttccgcaaaaccgccaataaggccgtgacccaacgcgacggggaagccagctgggat
atttcctggtcgaataccggaaatgtgccgctgcgcgtgcacgtggccgataacctgccc
tgtcgctacgtctccccggaaactcccggcgcctgcgccaccccggccctgcgcaatgtc
aaggccggcctggtccgcccgctccgtaagaatgtcccggccacagtcacctacaccacc
acgagtgggaagcagctgagcgtcgtcgtcgacccaactaccacccgcgatttcccgctc
accgttcccgcgggagaagagatcacctccatcgccctggacgtggacgtagtcaacggt
gagcggagcgatattacgctggaaatccgcggaaccgtggtggcggacttcccggccgat
gtgcacaacggcaccaccgcgcccgacggcgccacctacagctacgccccgcgctacgag
gtccccacgctggagaatcgcgccgtcgtaaccgcgcaatccctcgatttcgaaggcaac
ccgaccccggacctgcccgcgaaaatcaccacgcgggaatccgcggcgcaggtcgcgatt
gtggacggttaccccacttacggggtgtcgaaaacctcgcacctgggcggccagatggtc
ggcaacctcgataccaagcccggtgagctcttccaaaccggccagacctacaccttcggg
ctgggcttctacaccggcaagggcgccaagctctacccggtgattatggacctgctcgcc
cccggaatggaatacgatcccacgcagcagatcaccacctccgcgaactggccggccacc
ctcccgctcgacaaaatgcgggtggaaaccgagatgaaaaccgtggacggcaagcagcgc
caactggtgcgctttacctggccggaggatggtacgggtgattacttcgccccgcccagc
accggcgatcaaagccgctccaactcctcggaaatggtgctctacttcggtgcgaaaatc
accgcggccaccgagcctggcgaaaacaccaatgacatgatcctcgcggacgccaagcgc
ccgaacctgggcaccgccgtcgccccgaaccagtgcatccgcaattggtgggcgcgcacg
gatagccgcaaactcaccgataacctcgacggcctcaaccgccccgaagcgcgcggctgc
accacctccacgaagttcaacgtggcgggcttgccggcgctcgcgggtaagaattacgtg
aagggtgacgtcgataccgagttccaagccaacccgaattacgggacggtttcgccggcc
tccaatgccgaactcaagctggacctggtcaataacggcaatgcgggagtctccggggtg
gtggcctacgatgtgctgccctacccgggtgaccacggcgtgagcggggccaataccccg
gaaaatgagcgtggctccacgtggcgcccgcgcctcaacggcccgctgaccttcggggaa
ggcaccccgcagcccacctcggtgctgtactccacctcgatcaacccgtgccgtggcgaa
gtcatggagctgggtgccgctcaggattccagcccgcagaattgcgagccgggcacctgg
aagaccgccgaggaactgggcggggacttctcccaggtgcgcgctttccgggtggaattc
ccgcaggatgccaagctcacccgcgccgatacctggacgatcaacgccaatgtgacggct
ccggccgccgcccgcggtatcgcctggaatagctacgcggtgaccggcaagaacgccgaa
accggcgcgccggtcatgccgaccgagccggccaaggtggggctgaccatgcccttcgac
ctggacctcaccaaggaaaatattcacgcgaaatccgctgatctcggcgtgctgagcgag
aaggtgaccgctgatcccgcgcacgccggcctggccgagggcgtgcagctcgccgatatc
gagaagcagaacgaaaccgagcggtgggccaccggctccgtggtggagtacgtggtgcgc
gccaagaacgccggccccggcttcgccaccggcgtggaaatcaccgatatgctccccaag
ggcgtcacttacgtgggctactggagcaccaacggcgggtacgatgccgccaccggcacc
tggagcattaatgacacggtgaccgaagtggtggatccccacaccggtgacccggtggag
ggcgcggacccgagcgccaccgatgatgcctacctgcgcttcacccacgaacgcgggatc
gccccgggcggcgaagaggtgctgcacctgtacgcggtggttgatgaaaccgcgcgctcc
cagcaggtctgcaacgaggccctcaccccggctaaggatcgcctcgattccaagggccag
aagttcgcgggcaaacaggcgaatgcttgcctgaccgtgggcgtgaacctgggggaccgc
atctttgaggatacgaataacaacggcgcggacgatccgggcgagccgggcctggcgggc
gtcaccgtgaaggtgttccgccccggcgatacggaaccatttattacgacgacgacggac
gccagcggcaagtaccttgtgcgcggtctggaacctggcacgtactcggttgtggttgat
cgcgcgaccctcccgaagcgcgagggaacctgggaaacgacgcacgtccgggaaggctcg
ggcgataaggagaaggccagctccgggcagatcaccctgagcaccgccgatgtgctggat
gccgatttcggtttccactacgtggcgccggtcccgcctgtgccgccgcagcccccggtc
ccgccggagcctccggttccgccggcacccgagccgacaactccggaaccgaccacgccc
gcgccggctccttcgccgacgaccacggcgcccgcgccgcagccgacgacggatcgcgcg
cagcccgatccggagcccacgccgagcgcaacgacgacggagccggctccgcccgcgccg
cagcccacgacgccggaacctgtgccaacaaccacggcgccggcacccgggccgcaaccg
acaacgcccgagccgagcgctccggaacccacggtgcccgctccgagctcgccggagccg
agcgctccggaagtaacaaccccggttccgagcaccccggtgcccacggcgagcaccacg
gcgcccgcgccgcaggggagcccgagcacggacgggccggcggcgtcgtcgaccccgagc
gcgaacccaactccgcccgcgcaggccggctccggcccgcgcctgccgcacaccggtgcg
ggagtgctgggagccgcaggagcggtcctcgcgctgctggccggcggggtgctggtgctg
cgccgtcgtgtagaatag
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