Actinotignum timonense: CYJ17_0002715
Help
Entry
CYJ17_0002715 CDS
T09485
Name
(GenBank) SNF2-related protein
Organism
atim
Actinotignum timonense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
DEAD
Motif
Other DBs
NCBI-ProteinID:
WOT00554
LinkDB
All DBs
Position
complement(657471..660659)
Genome browser
AA seq
1062 aa
AA seq
DB search
MAVTLSSKIAALTSDDYEVYFSPQTRARAERYAEDGHVLDISEDSEGITAHVLGNGHTYQ
VVIEDTDPLLAYCSCPVAQYCKHILATLLICAENAADRSWRTLLTRVLHQAQATPKTRGL
GLILGRNSENGKITGMLYPAQRNLNGEWSRRSTAWSTIAPRYGSRANTEGFDPLQLSALR
NLYEAARRNPYSNPNISLRDLGAAAMAYLRNVHDAGVELYCGDVDQPLRLAHDPWGVQLS
LSAREPDSNDLLLRVLPETPNGTPAEVLAGTTPPLALSYEDGAYILGRLRSTIPDYLFQA
AEDAHPLTIPAADVPVFELNLLPELPEDIPVVSPDGAFTPHRFAEPNLHALIRRPSAEDG
AHYRHSAFLLEWYLGRRMLPADGSENPAESEGSESTSLYTELTVHRLLHEAPREQLTAVR
EIWTKATKLPPLDLLTTQSLDLSTYQTLREVVIPAWREAGITTTVMEDANLTIVTDTPVL
STSVSEENDWLDLNITVDVGEHQIPLNVLYEALTSGHDHLILGDVLIPLGSDFDALRQLL
HDAAALGTVTPESISVPRARAHALDLSALANPQALTDALTQLDHLGEPVPVPETFQGTLR
SYQEAGYSWLTHLARAHYGGILADDMGLGKTAQMLAMISGARAEGKLEGPVLVVAPTSVV
PVWRSEAERFTPELRVHTITGSGKRRSLALANIAASADIVVTSYTLLRLERAEYAKVDWG
GVILDEAQAVKNPSTVGYRAVAALTRPWTFAVTGTPVENSLSDLAALLALTSPGLLPGHA
RFTEQFQNPIEKFNDEEAAALLTRLVRPFMLRRRKAEVAKDLPARTVTELSVPLAPAHAQ
RYRKQLERERQEILGLIDDPNANRISILASLTRLRRMAIDPGLVDGRITTPPAKTNLLLE
HLQQIIPEGHRALVFSQFTTYLERIAHQLDREGITYSYLDGSTRDRAGAIAAFRDGSAPV
FLISLKAGGTGLTLTEADYVYIMDPWWNPAAEEQAIDRAHRIGQDKPVTVYRLASADTIE
EKVIALQARKRELAGLVDEAARGPISGADIRSLLELTGPEGR
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcacactaagttcaaagattgcggcactaacctcggatgactacgaggtttat
ttctcaccgcaaacccgcgcccgcgcggaacgttacgcggaggatggccatgtacttgat
atctccgaggattccgaggggattacggcccacgtactcggcaatgggcatacctaccag
gtcgttatcgaagatactgacccgctcctggcgtattgttcctgcccggtggctcaatac
tgtaaacatatcctcgcaaccctgctgatatgcgcagaaaatgccgccgatagatcctgg
cgcacgctgctgacacgggtattacatcaggcacaggccaccccgaaaacacggggcctc
gggcttattctcggccgtaattcggaaaacgggaaaattacgggaatgctgtatcccgcg
cagcgtaacctcaacggcgaatggtcgcggcgaagtaccgcgtggtccactatcgcgccg
cggtacggctcccgcgccaacaccgaaggctttgacccgctccagctcagtgcgctccgg
aacttgtacgaggcagcccggcggaatccctattccaacccgaatatttcactccgggac
cttggcgctgccgcgatggcgtacctgcgtaacgtccacgatgccggcgttgagctttat
tgcggtgatgttgatcagcccttgcgcctggctcatgacccctggggtgtgcagttgagc
ctttccgcccgcgaacctgatagtaatgacctgcttctgcgggtgcttccggaaactccg
aacggcacccccgccgaagttcttgcgggcaccaccccgcctctcgccctcagttacgag
gacggtgcttatatcctgggccgcctgcgctccactatccccgattatcttttccaagcc
gcggaagatgcccatcctctcaccatcccggcggcggatgttcctgtttttgaactcaat
ctcctcccggaactcccggaagatatccccgttgtctcccccgatggcgcgttcacgccg
caccgcttcgccgaaccgaatctccacgcgcttattcgccgcccttccgctgaggacggc
gcgcactatcggcacagcgctttcctcctggagtggtacctagggcggcgcatgctgccg
gccgatggtagtgaaaaccccgccgaatccgaaggctcggagagcacgtccctctatacg
gaactgacggtgcaccgcctcctccacgaggcgcctcgggaacagctcaccgcggtgcgt
gaaatctggacgaaggccacgaagctgccaccacttgaccttctaacaacccaaagtttg
gatctcagcacctatcagaccctgcgcgaagtcgttattccggcctggcgcgaggcaggt
atcaccactaccgtcatggaggatgccaatctcactatcgtgaccgacaccccggtgttg
agcaccagcgtgagcgaggagaacgactggcttgacctcaatatcaccgtcgacgtcggc
gagcatcagataccactcaacgtactctacgaggcactgaccagcgggcacgaccacctc
atcctcggcgatgtgctgatcccgctgggcagcgacttcgatgcgctgcgccagcttttg
cacgacgccgcagctctcggcaccgtcacccccgagagcatctccgtgccccgggcacgc
gcccatgccctggatctttccgcgctggccaatccgcaggcgctcaccgatgcgctcacc
cagcttgatcacctgggcgagccggtgccggttcccgaaacattccagggcaccctgcgc
tcctatcaggaagccggttattcctggctcacccacctggcgcgcgctcattacggcggg
atcttggccgatgatatgggcctgggcaaaaccgcgcagatgctcgccatgatcagcggc
gcacgcgccgagggcaagttagaaggcccggtgctcgtggtggctcccacctccgtggtg
ccggtgtggcgcagcgaagcggagcgcttcaccccggagctgcgggtacacaccatcacc
ggctcgggtaaacgccgttcactggccctggcaaatattgccgcgagcgcggatattgtg
gtgacctcctataccctgctgcgcctggagcgcgcggagtacgcgaaggttgattggggt
ggggttatcctcgatgaggcccaggcggtgaagaaccccagcacggtgggctatcgcgcc
gtcgccgcgctcacccgcccctggactttcgcggttacgggcactccggtggaaaatagc
ctctcggatttggcggcgctgctggccctcaccagcccgggcctgctccccgggcacgcg
cgtttcaccgagcagttccagaacccgattgaaaaatttaatgacgaagaagccgccgcg
ctgctcacgcgcctggtgcggccctttatgttacgacgccgcaaagccgaggtggccaag
gacctcccggcccgcaccgtgaccgagctgagcgtgcccctcgcgcccgcccacgcgcag
cgctatcgcaagcagctggaacgcgagcgccaggaaatcctcgggcttatcgatgatccg
aatgccaatcgcatttcgattctggcttccctcacccggttgcggcgcatggccatcgac
ccgggcctggtggacgggcggattaccaccccgccggcgaaaaccaatctgctcctcgag
cacctccagcagatcatcccggagggccatcgcgccctggtgttctcccagttcaccacc
tatttggagcggattgcccaccagctggatcgcgagggtattacctatagctacctggat
ggttccacccgggaccgggccggcgcgattgcagcgttccgcgatggcagcgccccggtg
ttccttatttccctcaaggcgggtggtaccgggcttaccctcacggaagcggattacgta
tacattatggatccgtggtggaatccggccgccgaagagcaggccattgaccgggcccat
cgtattggccaggataagccggtcaccgtctaccggctggcctcggcggataccatcgag
gagaaagtcatcgccctgcaggcgcgcaagcgtgagctggccggcctggttgatgaggcg
gcccgcgggcccatctcaggggcggatatccgctcccttctcgagctcaccgggccggaa
ggccgctag
DBGET
integrated database retrieval system
