Actinotignum timonense: CYJ17_0003860
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Entry
CYJ17_0003860 CDS
T09485
Name
(GenBank) Ig-like domain-containing protein
Organism
atim
Actinotignum timonense
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP3_bac
Big_9
Big_6
Cadherin_5
Ig_VWA7
Motif
Other DBs
NCBI-ProteinID:
WOT00770
LinkDB
All DBs
Position
932012..937291
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AA seq
1759 aa
AA seq
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MRIWSDNPDKTKYVNSFVEADGVFVSNGMVQRYVGTWNAWPQSAAENFNISYQERPQISE
MFPDESTWKETTNQENGGWVSGRVFYDQRNVFGAPKAVRMFQDSFGDVAVPGVKVVGAYV
QDGVAKLFDEWKKNHNGYTREQFKAAQREIMAKYEQETGKSAIAETSYAVTDAKGNYHIQ
FQGLWGDSYSYKGIVNAGQHGDPVPEGASASWLKGNLKSRHVNVEYMYVAPVLPDGVGGA
LDNFPDNLYQYGAQVVDYATDGAMSNIRDQDFALRMEDRDFQVLEYNQTTKPAAPGVTVE
TKATGFVPSSGHEIVWTDSEGNEVHKCISTSSNLGVVNSCPLTVPADLDHDEIYTATIYP
EGSRDTALAKDAFAAKPTPEYKHTSVDLDTTETVASPLHKENGTKPRDAKYAPLDDNTKI
PAELLADVDQAKVKVGQQPWATVNEDGTISLAPTAGNAEVGEYLIPVKMTTPTGEKILLA
PITVRDPNSDGDNDGTPDLKDQCPAVAGPASNNGCPAWGDGDGKPGAEVTLEKDPANGKV
PDTASCEATGGATCAIGPDGNVVVKIPGDAKDKDEITVTIKDGDKIFDTSKVTVKDPDTD
GDTVPDSLDKCPDVAGPASNNGCPAWSDGDGKPGADVTLEKDPANGDIPNTATCEAGNGA
SCTIGPDGNVVVKIPEDAAPGTEIPVTIKDGDTTLDTSKVTVIPANNPIWNDTTTEPSAP
VKLPNEGGPVPAGSTVEVTGPGTATLNEDGSITVTPNANAKDKDQIVVKVKDPNGKDLDS
ATVTIADPDTDGDNVPDGKDQCPTIAGPASNNGCPAWGDGDGKPGTDVTLEKDPANGPIP
SSATCEATGGATCTIGGDGNVVVKIPGDAKDKDEITVTIKDGDKVLDTSKVTVTDPDTDG
DTVPDALDQCPDIAGPASNNGCPAWGDGDGKPGTDVTLEKDPANGPIPSSATCEATGGAT
CTIGGDGNVVVKVPGDATPGTEITVTIKDGDKTLDTSKVTVTEPDKPVWNDGNSKPGVPV
DLPNTGGPVPDGTTVEVNGPGTATLNPDGSITVTPNPDAKDKDEVVVTVKDRDGKELDTV
TVTVNDPDTDGDGLTDSEEEKIGTDPNNPDTDGDGINDGDEVNGTKNPFQDDKSDPDGKP
GNTDPLNPDSDGDGVNDGDEVTGKHNNGNPTNPNKADSDGDGVTDGDEKKDGTDPNNPDT
DGDGVNDGDEKKDGTDPKNPDTDGDGINDGDEKKDGTDPKNPDTDGDGVTDGREKDLGTD
PKNSDTDGDGLTDGEEAGTDIDENGKPARNEDGTPKVDDSKATKTDPKNPDTDGDGINDG
DEVNGTKNPFKDDKFNKDGKPGNTDPLNPDTDGDGVNDGDEVTGKNNGGKPTNPNKADTD
GDGVTDADEIKDGTDPNNADTDGDGVTDGDEKKDGTDPKNPDTDGDGVTDGREKDLGTDP
KNPDTDGDGLTDGEEVGTDIDENGKPARNEDGTPKVDDSKATKTDPKNPDTDGDGLTDGE
EKKIGTDPLNPDTDGDGLTDGDEVNGTKNPFQDDKFNKGGKPGNTDPLNPDTDGDGLTDG
DEVTGKNNGGKPTNPNKADTDGDGVNDGDEINNGTDPNKGDTDGDGLTDGEEKVIGTDPK
NPDTDGDGINDGDEVNGTKNPFKDDKFNKDGKPGNTDPLNPDTDGDGLTDGDEVTGAKNG
GKPTNPNKADTDGDGINDGDEIKNGTDPLNPNDPGKPAPKTKKVKKTLQVTGATSVGLAG
TAAFLLLAGGLVVTRRRKA
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtatttggtccgataaccccgataaaaccaagtacgtcaattcatttgtcgaagcc
gacggcgtatttgttagtaacgggatggtgcagcgttatgtaggtacgtggaatgcatgg
ccacagtccgctgcggagaacttcaatatttcatatcaggagcgcccgcaaattagcgag
atgttcccggatgagagcacttggaaggaaaccaccaaccaagaaaacggtggctgggtt
tcgggtcgtgttttctatgaccagaggaatgtgtttggtgcacccaaggcggtgcgcatg
ttccaagacagctttggtgatgttgcagtacctggcgttaaagtagtcggcgcatacgtt
caagacggagtggcgaaactcttcgacgaatggaagaagaaccacaacggctatactcgc
gagcagtttaaagctgcgcagcgtgaaattatggcgaagtatgagcaggagaccgggaag
agcgctatcgccgagacttcctacgcggtcacggatgccaagggtaattatcacatccag
ttccagggcctgtggggtgactcttacagctacaagggaattgtgaatgctgggcaacac
ggcgatccggttcccgaaggtgcgagcgcttcgtggctcaagggtaacctcaagtcgcga
cacgttaacgtcgaatatatgtacgttgctcccgttcttcctgatggagtagggggcgcc
cttgataacttcccggataacttgtatcaatacggcgcccaggttgttgactatgcgacc
gacggcgctatgagcaatattagggatcaggattttgcccttcgtatggaggatcgtgat
ttccaggttttggagtacaaccagaccactaagcctgcggctcctggcgtgacggtcgaa
acgaaggctactggttttgttccctcgagcggtcacgaaattgtgtggacggattccgag
ggtaacgaggtgcataagtgcatctccacatcttcaaacctgggagttgtgaactcgtgt
cctctgaccgttccggctgatctcgatcatgacgaaatctacacggcaacaatctatccc
gagggctcgcgcgatactgcgctagccaaggacgcatttgccgccaagcccactccggag
tacaagcacacctcggttgacctcgacacgaccgagactgttgcttcgccgcttcacaag
gaaaacggaaccaagccgcgagatgccaagtatgctccgcttgatgacaacacgaagatt
ccggcggaactgcttgctgatgtcgaccaggccaaggtgaaggttggccagcagccctgg
gcgacggttaatgaggatgggacaatttcccttgctccgaccgctggaaatgctgaagtt
ggcgaatacctcatcccggtcaagatgactaccccgacgggtgaaaagattcttcttgct
ccgattacggtgcgtgatccgaattccgatggtgataacgacggcactccggacctgaag
gatcagtgtcctgctgttgctgggccggcttctaataatggttgccctgcgtggggtgat
ggtgatggtaagcccggcgctgaagtgacgctggagaaggaccctgctaatggcaaggtt
ccggatactgcatcatgcgaggcgactggtggtgccacctgcgccattggccccgatggc
aacgtcgtcgtcaagatccctggtgacgccaaggataaggacgagattactgtcacgatc
aaggatggtgacaagatcttcgacacctccaaggtgaccgtcaaggatccggataccgat
ggcgatactgtcccggattctttggataagtgcccggatgttgctgggccggcttctaat
aatggttgccctgcgtggagtgatggtgatggtaagcctggcgcggatgtgaccttggag
aaggatccggctaacggcgatatcccgaacaccgctacttgtgaagccggtaatggtgct
agctgcaccattggcccggatggcaacgtcgtcgtcaagattccggaagacgctgccccc
ggtactgagattccggtgaccattaaggatggtgacacgaccctggacacctccaaggtg
accgttattcccgcgaacaacccgatctggaatgacacgaccaccgagccgtccgcaccg
gttaagctgcctaatgagggtggccccgtcccggcaggctccacggttgaggtgaccggg
ccgggtaccgcaaccctgaacgaagacggctcgatcaccgtcactccgaacgcgaacgcc
aaggataaggaccagatcgtcgtcaaggtcaaggacccgaacggtaaggatcttgactcc
gctaccgtgaccattgctgaccccgacaccgacggcgacaatgtccccgatggcaaggat
cagtgcccgaccatcgctgggccggcttccaataacggttgcccggcgtggggtgatggt
gatggtaagcccggcactgatgtgacgctggagaaggatccggctaatggtccgatcccg
tcctcggccacctgcgaagcaaccggtggtgccacctgcactattggcggggatggcaac
gtcgtcgtcaagattcctggggatgctaaggataaggacgagatcaccgtgaccatcaag
gatggtgacaaggtcctcgacacctccaaggtgaccgtcaccgatccggataccgatggc
gataccgtcccggatgcgcttgatcagtgcccggatattgccggtccggcttccaataac
ggttgccctgcgtggggtgatggtgatggtaagcccggcactgatgtgacgctggagaag
gatcctgctaatggtccgattccgtcctcggccacatgcgaagcaaccggtggtgccacc
tgcactattggcggggatggcaacgtcgtcgtcaaggttcctggtgacgcgacccctggc
actgaaatcacagtaaccattaaggacggcgataagacactcgatacctccaaggtgacg
gttaccgagccggacaagcctgtgtggaacgacggaaacagtaagccgggtgttccagtg
gaccttcctaataccggcgggccggtacccgacggcacaacggtggaagtgaacggtccg
ggtaccgcgaccctcaatcccgatggttcaatcacggttaccccgaatccggatgctaag
gacaaggacgaagttgtcgtcacggtcaaggatcgcgatggcaaggaactcgataccgta
accgtgacggtcaatgatcctgatactgacggcgatggcctgaccgattccgaagaagaa
aagatcggaaccgatccgaataacccggataccgacggcgatggcatcaatgacggtgac
gaagtcaatggcaccaagaacccgttccaggacgacaagtctgatccggacggtaagcct
ggtaatactgacccgctcaaccctgactcggatggcgatggtgtgaatgacggtgacgaa
gtgaccggtaagcacaacaatggcaatccgactaacccgaacaaggccgactctgatggt
gacggcgtgacggatggggatgagaagaaggacggcaccgatccgaataacccggacacc
gacggtgacggcgtgaatgacggtgacgagaagaaggacggaactgacccgaagaacccg
gacaccgacggcgatggcatcaacgacggggacgagaagaaggacgggaccgatccgaag
aacccggacaccgacggcgacggtgtgactgacggtcgtgaaaaggacctgggcaccgac
ccgaagaattctgatactgatggtgacggcctgaccgatggtgaggaagccggcacggac
attgacgagaacggtaagcccgctcgtaatgaggatggcaccccgaaggtcgatgattcc
aaggccaccaagaccgacccgaagaacccggataccgatggtgacggtatcaacgacggc
gacgaagtcaacggcaccaagaacccgttcaaggatgacaagttcaataaggacggtaag
cctggtaatactgatccgctcaaccctgacactgatggtgacggggtgaacgacggtgac
gaagtgaccggtaagaataacggtggcaagccgaccaacccgaataaggccgataccgat
ggcgatggcgtgaccgacgctgacgaaatcaaggacggcacggacccgaacaatgctgac
accgatggtgacggcgtgacggacggggacgaaaagaaggacggcactgatccgaagaac
ccggatactgacggtgatggtgtgactgatggtcgtgaaaaggacctgggcaccgatccg
aagaacccggatactgacggtgatggcctgaccgacggcgaggaagttggcacggatatc
gacgagaacggtaagcctgctcgtaatgaggatggcaccccgaaggttgatgactccaag
gccaccaagaccgacccgaagaaccccgatactgacggtgatggactcactgatggtgag
gaaaagaagatcggtactgacccattgaacccggataccgatggtgacgggctcaccgat
ggggacgaggtgaacggcactaagaacccgttccaggacgataagttcaataagggcggt
aagcctggtaacaccgacccgctcaaccctgacaccgacggtgacggtctcaccgatggt
gacgaagtcaccggcaagaacaacggtggcaaaccgaccaacccgaacaaggccgatacc
gatggcgacggcgtcaatgatggcgacgaaatcaacaacggtaccgacccgaataagggc
gacaccgatggtgatggcctgaccgatggtgaagaaaaggtgatcggcactgacccgaag
aacccggacaccgacggtgacggcatcaacgacggtgacgaggttaatggcaccaagaac
ccgttcaaggacgataagttcaataaggacggtaagcctggtaacactgacccgctcaac
ccggataccgatggtgacgggctgaccgatggtgacgaggtaaccggcgcgaagaacggt
ggcaagccgactaacccgaataaggccgataccgatggtgacggtatcaacgacggtgac
gaaattaagaacggcaccgacccgttgaacccgaacgatccgggcaagcctgcaccgaag
accaagaaggtcaagaagactcttcaggtcactggtgcaacgagcgtgggtcttgctggt
acggcggcattcttgctgcttgctggcgggctcgtggtgacgcggcgccgcaaggcataa
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