Actinotignum timonense: CYJ17_0003870
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Entry
CYJ17_0003870 CDS
T09485
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
atim
Actinotignum timonense
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atim03400
]
CYJ17_0003870
DNA repair and recombination proteins [BR:
atim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CYJ17_0003870
Archaeal homologous recombinant proteins
CYJ17_0003870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
WOT00772
LinkDB
All DBs
Position
complement(940504..941841)
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AA seq
445 aa
AA seq
DB search
MKILHTSDWHLGRTLHRADLTPAFEMWVDHVVDTVRERGVDALLISGDVYDRSVPPAPMV
ELFSRTLRRLAQLTTVILISGNHDSPQRLGFGAELFQEHIVIRTDPLRCAQPVEVRDRAG
NLGALVYPIPYLDPDVERRRLAGDAAHAGHAGADHLEGADNADRVDHVHHVDHADHVDRN
DGAELLERSHTAVMHAALERIAADIQHGPHAGKPVARIAMAHAFVAGGAASESERDISVG
GVEVVPAALFALGSAGASATAGLSYVALGHLHSPQRVGGAPEPGTSEASRLPPMRYSGSP
IAFSFSETRPKSSVLLTFEGGTLVEEELIPAPVWRPIVTIEAPLAEVLSPAHRDDRDKFA
RILVTDPARPADLTTRVRAAFPHALEIRHVVDPAATRHSTADTRRLDSLSVLRQFMTESG
HRDLTEEENQVMVAAWEAVRTGEKE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttgcacacctccgattggcacctcgggcgcaccctgcaccgggcggatctc
acgccggcctttgaaatgtgggtggatcacgtggtggataccgtgcgggaacgcggtgta
gatgcccttctgattagcggggatgtctatgatcgcagcgtcccacccgctcccatggtt
gagcttttttcgcgcaccctgcgccgactcgcgcaactcaccacggtcattttgatttcc
gggaaccatgattccccgcagcgcctaggattcggggcggagcttttccaggagcatatc
gtcattcgcaccgatccgctgcgctgcgcccagccggtagaagtgcgtgatcgcgccggt
aatcttggcgcactggtttaccccattccctatttggatcccgatgtggaacgccgccgc
ctggcaggcgatgctgctcatgctggtcacgctggcgcggatcacttggaaggtgcggat
aatgcggatcgtgtcgatcatgttcatcacgttgatcacgctgatcacgttgatcgcaac
gatggcgcagagctgttggaacgctcgcacaccgcggtcatgcacgcagctttggagcgt
attgccgcagatattcagcacggcccgcacgctggcaagccggtggcacgtatcgctatg
gcacacgctttcgttgccggcggggcggccagcgaatccgaacgcgatatttcggtgggc
ggggtggaagttgttcccgccgcgcttttcgccctgggaagcgcaggggcaagcgccacg
gcgggcctgagctacgtggcactgggccacctgcattccccacagcgggtgggcggtgcg
ccagaaccgggtacttctgaagctagcaggctgccgcctatgcggtactcgggttcgcct
atcgctttttctttctcggaaacccggcccaaatcttctgttcttctcacctttgaaggc
gggaccctggtggaagaagaactcattccggctccggtatggcgccccatcgtcaccatc
gaagcaccgctagccgaggtactcagccccgcacaccgtgacgatcgggataaattcgcg
cgtattctggtaaccgatccggcccgcccggcggatctcaccacccgggtgcgggccgct
ttcccgcacgctttggaaattcgccacgtggtggatccggccgccacccgccacagcaca
gcggatactcgccgccttgattccctgagcgtgctacgccaattcatgacggaaagtggg
caccgggatctcacggaagaagaaaaccaggtcatggtggcggcatgggaagccgtccgc
accggggagaaggagtag
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