Actinotignum timonense: CYJ17_0004220
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Entry
CYJ17_0004220 CDS
T09485
Name
(GenBank) extracellular solute-binding protein
KO
K15770
arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
Organism
atim
Actinotignum timonense
Pathway
atim02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CYJ17_0004220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atim02000
]
CYJ17_0004220
Transporters [BR:
atim02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
CYJ17_0004220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
C2-C2_1
Motif
Other DBs
NCBI-ProteinID:
WOT00839
LinkDB
All DBs
Position
1010758..1012008
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AA seq
416 aa
AA seq
DB search
MRRSISAMAAVSALAFVLGACGGNGGSADKSEAPAGATSAAPAAGGGATITVWTDSNRQP
ALESAAKKFESETGNHVELVVKEFGDVRAEFLTQVSNGQGPDITVGANDWLGEFVANGVV
APIELGDKAKDFNDVATTAFSTGGNLYGLPYALENLALIRNTALADSTPATFDEMIAKGK
EAGVKYPFLVQTTDKGDPYTYYPFQQSFGAPVFETNADGSTSKNLGMGGANGEAFATWLS
EQGKAGVFETAMTYDIAVDAFKKGESPYILGGPWMIEDFRSAGLKVAVEPIPAPGPKAAT
PLVGVQGFYVSAQSKNQIVANQFLVDYMATPEVQLDIYKAGNRLPALTAAAQEAQKDEVT
AGFAKAAEGAQPMPTIPEMGAVWVPWGVTEAQIIDGAEPVAAWQSLIQNLQAELAK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcgacggagcataagcgcgatggccgcggtatccgcgctggcgtttgttttaggcgcc
tgcggtggcaacggcggttcggctgataagagcgaagcacctgccggagccacctcggca
gcaccggcagccggtggcggggccaccattacggtgtggactgattccaaccgccagccg
gccttggaaagcgccgcgaagaaattcgaatcggaaaccggcaaccacgtggagctcgtg
gtcaaggaattcggggatgtgcgcgcggagttcctcacccaggtctccaacggtcagggc
ccggatatcaccgtgggtgccaatgattggctcggtgagttcgtggcgaacggcgtcgtc
gcccccatcgaattaggcgataaggccaaggacttcaatgacgtggccaccacggccttc
tccaccggcgggaacctgtacggtctgccctacgcgctggagaacctcgcgctcatccgc
aataccgcgctggcggattccaccccggccactttcgatgagatgatcgccaagggcaag
gaagccggcgtgaagtaccccttcctcgtccagaccaccgataagggcgatccttacacc
tattaccccttccagcagtccttcggggcgcccgtttttgagacgaatgcggacggttcc
acctcgaagaaccttggcatgggcggggccaatggcgaagctttcgccacctggctgagt
gagcagggcaaggccggcgttttcgaaaccgcgatgacctacgatattgcggttgatgcg
ttcaagaagggtgaatcgccctatatcctgggcggcccgtggatgattgaggacttccgc
agcgccggcctcaaggtcgcggtggagccgattccggcgcccggccccaaggcggctacc
ccgctcgtgggcgtgcagggcttctatgtttccgcgcagtccaagaaccagattgtggcc
aaccagttcctcgttgattacatggccaccccggaggtgcagctggatatttacaaggcc
ggcaaccgcctcccggcgctgaccgccgcggctcaggaagcccagaaggatgaagtcacc
gcaggcttcgccaaggctgccgaaggcgcccagccgatgcccaccatccccgaaatgggt
gcggtgtgggtgccctggggcgtcaccgaagctcagatcattgacggcgccgaaccggtg
gccgcatggcagagcctcatccagaatctgcaggcagaactagccaagtaa
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