Actinotignum timonense: CYJ17_0004565
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Entry
CYJ17_0004565 CDS
T09485
Name
(GenBank) GntR family transcriptional regulator
KO
K03710
GntR family transcriptional regulator
Organism
atim
Actinotignum timonense
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atim03000
]
CYJ17_0004565
Transcription factors [BR:
atim03000
]
Prokaryotic type
Helix-turn-helix
GntR family
CYJ17_0004565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
UTRA
HTH_Crp_2
HTH_DeoR
MarR_2
HTH_36
HTH_11
PaaX
RP-C
Rrf2
TrmB
HTH_8
HTH_20
HTH_24
HTH_41
HTH_IclR
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
WOT00907
LinkDB
All DBs
Position
1109928..1110701
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AA seq
257 aa
AA seq
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MTLSPMYPHSDNPVTPVVTRAPNVGAAAEVASVLRKRIHAGEWEPGEALDSEPVLAAELG
VSRNTLRSALQELAAQGLVIRRRGSGTFVTDVQAVMASNLSELTSMTQTIAAAGMDPTIR
YTEKRLRAATETEIKLLRLEDNEPVIETRREVEANKAMVSVSFEVIRAGIFPPEFDVQSI
HGSIFALCDLVGHSIKYASTDLHAVVGSDFGMQHEARDESFLGLYQLHFDRDHLPILFAK
TYFREGRFQFSMMRVRS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgactctgagccctatgtatccgcattctgataatccggtaactccagtggtcacacgc
gcacccaatgtcggtgcggccgccgaagtggcatcggttttaaggaagagaatccatgcg
ggtgagtgggaaccgggagaggcgttggactctgagccggtgcttgcggcggaacttggg
gtatctcgaaataccttgaggtcagcattacaggagttggccgctcagggtttggttatt
cgtcgccgaggctcgggaacatttgttactgacgtacaggcggtgatggcttctaatctc
tcagagttaacatcgatgactcagacaatcgcagcggcggggatggatccaacgattcga
tataccgaaaaacgtctccgtgcggcaacagaaacagaaataaagttgctgcgtcttgag
gataacgaaccagttatcgaaactcgtcgtgaagtggaagcaaataaagcgatggtatct
gtatcgttcgaagtcattcgcgccggaatcttcccccctgaattcgatgtgcagtcgata
cacggctcgatttttgcgctatgcgatcttgtaggccactcgatcaaatacgcctcgacc
gatctacacgcggttgtgggaagtgatttcgggatgcaacacgaagcccgcgatgagtcc
ttcttagggctgtaccagttgcatttcgatagagaccatttaccgattttgttcgctaag
acgtatttccgcgagggacgttttcagttctcgatgatgcgggtgagaagttga
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