Actinotignum timonense: CYJ17_0005405
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Entry
CYJ17_0005405 CDS
T09485
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
atim
Actinotignum timonense
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atim03036
]
CYJ17_0005405 (smc)
Chromosome and associated proteins [BR:
atim03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
CYJ17_0005405 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
SMC_hinge
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WOS99274
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All DBs
Position
1313657..1317193
Genome browser
AA seq
1178 aa
AA seq
DB search
MRGFKSFATATTVRFEPGINAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGSMADVIFA
GTSRRPALGRAEVSLTIDNSDGVLPIEYSEVTITRTLFRAGGSEYAINGTPARLLDVQEL
LSDTGMGREMHVIIGQGRLDEVLTSSPEERRNIVEEAAGVLKHRRRKEKTLRKLEAMKGS
FTRVEDLTAELRRQLGPLAKQAEAARRAQVIQATERDARARLLADDLAQAQARLEAGAAE
DQRTAQLREENQAALTQARAALAEAEEHHARLSPQLSALRDSSERLASLEERFRAMDELA
RERERTLSTMPARGGQDDPEELQARAVRARAEEEELEGRVREAQDALRTVLTQREETETA
ESAAERAYNQASRARADARENAARRAGKVSAVRSRLEALQAEVERVEKDVAAARQRVQTT
SVQVTDIEEELVATSAGDDTLATTHEEHTRAHLAARAAVEEARANEARAREEMARLQAIV
DTLALSLEPEDATAWAIEHGAALLRDHLHVERGWESAAENALMGAASGAVVDNLDSAVDI
LRGAAQVQAGRLTLTIAGGKNDDAAAAAREAALNAAFETVRPDPDAAVHALAVVSGSQSG
SDLAGLLTQLLAGTALTADLVTARQLVSAGAPRAVTRTGDIITACTATGGEATAAATLAR
QAAYQEASEQLDAAATAADEAAAALRKAETAEEDARARAEASGSELTARDSNLAAATAQL
GALRQALSAARADEERAVARAASLREDIAARQAELDSFAEPEEDTADIPGDGELARLSQQ
RDSAHEAAVGARKQETEARLALRTAEERFRALSGRADALDNRARLARERIEREERARQIR
GQHAVLAGQVAAGAVRALAYVRSLRAEVAERRRRVEEEQHGAEGQLTHLRERVDQLRTRE
RELADSTHARELATARARMEYEQLATGALEDLGVDSTTLVEEFGPHIQVPTEDGAVPYVR
AEQERRLATAQRALARLGTINPLALEEHAALEERQKYLAQQLDDLKKTRADLLDIVAELD
ERVTLVMKAALSDISARFEQVFARLFPGGEGRLIITDPENVLTTGVEIEARPPGKRVKRL
SLLSGGERSLTAIAFLVAIFMARPSPFYVMDEVEAALDDVNLGRLLEIFRELQRSSQLLV
ITHQKRTMEIADALYGVAMREDGVSTVVSQRMSELREQ
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggattcaaatcctttgccaccgccaccacagtgcgctttgaacccggaattaac
gcggtggtcggccctaatggttcagggaaatccaacgtggtggacgccctcgcctgggtg
atgggcgagcagggcgcgaaaactctacggggtggctccatggcggatgttattttcgcc
ggcacctcgcgccgtcccgcgctcggacgcgcggaagtttccctcaccatcgataattcc
gatggcgtgctccccatcgaatattccgaagtgaccatcacccgtactctcttccgcgcc
ggcggctccgaatacgccattaacggcaccccggcacgcctcctcgatgtccaggaactg
ctctcggataccggcatggggcgggaaatgcacgtcattatcgggcagggccgcctcgac
gaagttctcacctccagtcccgaagagcgccgcaatatcgttgaagaagccgccggggtg
ctcaaacaccgccgtcgcaaagaaaaaactctgcgtaaactcgaagcgatgaagggctcg
ttcacgcgggtggaggatctcaccgcggagctgcgccgtcagctcggaccgctcgccaaa
caggcggaggccgcccgccgtgcccaggttatccaagccaccgagcgcgacgctcgggcc
cgccttctcgctgatgatctagcacaggcgcaggcgcggctggaagccggggctgccgaa
gaccagcgcaccgcccagctgcgtgaagaaaaccaagcggccctcacccaggcccgcgcc
gccctcgccgaggcagaagaacaccatgcgcgcctgagccctcagctctctgcgttgcgc
gatagctccgagcggctcgcctccctcgaggaacgattccgcgccatggacgaactggcg
cgcgaacgcgaacgtaccctgagcaccatgccagcacggggcgggcaagacgatcccgag
gaactccaggcgcgcgccgtccgggctcgcgccgaagaagaagaactggaggggcgcgta
cgtgaggcccaggatgccctgcgcaccgtcctcacccagcgtgaggaaactgaaaccgcg
gaatctgccgctgagcgcgcctataaccaggcgagccgtgcccgtgctgacgcgcgagag
aacgccgcgcgccgggctgggaaagtttccgcggtgcgctcccggctcgaggcactccaa
gccgaagttgaacgcgtagagaaggatgtggcggccgcgcgtcagcgcgtgcaaaccacc
agcgtgcaggtcacggacatcgaagaagaactcgttgccacctccgccggggacgatacc
ctcgccaccacccacgaagaacatactcgggcccatctcgcagcccgcgccgccgtggaa
gaagcccgagcaaacgaggcacgcgcccgcgaagagatggcgcgcttacaagcgattgtc
gatactctcgcgctctcgctggaacccgaagatgccactgcctgggctatcgagcacggt
gcggccctgttgcgcgaccacctccacgtggaacgcggatgggaaagcgcggcggaaaat
gcactgatgggcgccgcatccggtgcggtggtggacaatctggacagcgccgtcgatatt
ttgcggggcgccgcgcaggtgcaagccgggcgccttaccctcaccattgcgggagggaag
aacgacgacgccgcagccgccgcccgcgaagctgcgctcaatgctgctttcgaaacggtg
cgcccagatccggatgccgcagttcatgccctggcggtggtgagcgggtcccagtcaggc
agcgatctagctggcctcctcacacagctcctggccggcaccgccctcactgccgatctt
gtgaccgcccgtcagctcgtgagtgccggggctccccgtgcggtgacacggaccggagat
attatcaccgcctgcaccgctaccgggggagaggccaccgccgcggctaccctcgcccgc
caagctgcctaccaggaggcctccgagcagcttgatgccgccgccaccgcagccgatgag
gcagccgccgcgctccggaaagcggaaaccgctgaagaagatgcccgcgcccgcgccgaa
gcttccgggagtgaactgacggcgcgcgattctaacctggccgccgccaccgcccaattg
ggagccctgcgtcaggctctttccgccgcgcgtgccgatgaagagcgcgccgtcgcccgc
gccgcctccttgcgggaagatatcgccgcccggcaagcagagctggatagcttcgcggag
cctgaagaagatactgccgatattccaggtgatggcgaacttgcccggctctctcagcag
cgcgatagcgcgcatgaggccgccgtgggagcccgcaaacaggaaacggaggctcggctg
gcgctgcgcaccgccgaagaacgcttccgggccctgagcgggcgggctgatgccctggat
aaccgggcccggctggcccgcgaacgtattgagcgggaagaacgcgcccgccagatccgt
ggccagcacgcggtgctggcggggcaggtcgcagccggggcggtgcgcgccttggcttac
gtgcgcagcctacgtgccgaggtggccgagcggcgtcgtcgggtagaagaagaacaacac
ggcgctgaggggcagctcacgcacctacgcgaacgcgtcgatcagctacgcacccgcgaa
cgcgagctcgcagattccacccacgcccgcgaactggcgaccgcccgtgcccgcatggaa
tacgagcagctagccaccggtgccctcgaggacctgggcgtcgatagcactaccctcgtc
gaagaattcggaccgcatatccaggtgcccaccgaggacggtgcggtgccctacgtgcgc
gccgaacaggaacggcgcctggctacggcgcagcgtgccctcgcgcggctgggtaccatt
aacccgctcgccctggaggaacacgccgcgctggaagaacgtcaaaagtaccttgcccag
caacttgatgacctgaagaaaacccgcgctgaccttctcgatattgtggcggagcttgat
gaacgagtcaccctcgttatgaaagccgcgcttagcgatattagcgcccgttttgagcag
gtctttgctcgccttttcccgggtggggaagggcgccttattatcaccgacccggagaat
gtgctgaccaccggggtggaaattgaggcgcggcctcccggtaaacgcgttaagcggctg
tccctcctttcgggcggggagcgctcgctcaccgctattgctttccttgtggcgatcttt
atggctcgcccctccccgttctatgtgatggacgaggtggaagccgcccttgatgacgtt
aatctggggcgccttctcgaaattttccgggagttgcagcgctcttcccagctcctggtc
atcacccaccagaaacgcaccatggaaattgccgatgcgctatacggggtggcaatgcgc
gaagacggggtatccaccgtggtttcccagcgcatgtctgagctgcgcgaacaatga
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